Rn00594583_m1 Best Coverage

• Gene Symbol: Csnk1d
• Gene Name: casein kinase 1, delta
• Gene Aliases: -
• Chromosome Location: Chr.10: 110147782 - 110182413 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Csnk1d
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_139060.3	NP_620691.2	7 - 8	1370		56
	XM_008768511.1	XP_008766733.1	7 - 8	1375		56
GenBank mRNA	AB063114.1	-	7 - 8	1362		56

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000004300.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Recommended Assay, Rattus norvegicus, Rat Wnt Panel, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Csnk1d

Gene Ontology Categories:

Process(es)

mitotic cell cycle
positive regulation of protein phosphorylation
protein phosphorylation
endocytosis
regulation of cell shape
Wnt signaling pathway
peptidyl-serine phosphorylation
positive regulation of proteasomal ubiquitin-dependent protein catabolic process
circadian regulation of gene expression
regulation of circadian rhythm
spindle assembly
positive regulation of canonical Wnt signaling pathway

Function(s)

protein kinase activity
protein serine/threonine kinase activity
protein binding
ATP binding
peptide binding
tau-protein kinase activity
phosphoprotein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P133904	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P133899	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	27329	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	872362	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	952388	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	619998	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	575107	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	767458	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	99535	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	254544	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	755117	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	654945	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	344503	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	125581	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	244115	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	813399	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	831510	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	104611	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	552884	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	895927	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	783770	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	163502	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	176579	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	57510	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P133904	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P133899	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P133899	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P133904	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P133904	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P133899	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P509473	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P994293	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	8255	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	65387	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	93240	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10749746	-	-
Affymetrix Rat Gene 1.0 ST Array	10749749	-	-
Affymetrix Rat Gene 1.0 ST Array	10749754	-	-
Affymetrix Rat Gene 1.0 ST Array	10749752	-	-
Affymetrix Rat Gene 1.0 ST Array	10749756	-	-
Affymetrix Rat Gene 1.0 ST Array	10749753	-	-
Affymetrix Rat Gene 1.0 ST Array	10749750	-	-
Affymetrix Rat Gene 1.0 ST Array	10749755	-	-
Affymetrix Rat Gene 1.0 ST Array	10749745	-	-
Affymetrix Rat Gene 1.0 ST Array	10749748	-	-
Affymetrix Rat Gene 1.0 ST Array	10749751	-	-
Affymetrix Rat Gene 1.1 ST Array	10749742	-	-
Rat Genome 230 2.0 Array	1370819_PM_at	-	-
Rat Genome 230 2.0 Array	1370528_PM_at	-	-
Rat Genome 230 2.0 Array	1395914_PM_at	-	-
Rat Genome 230 2.0 Array	1370819_at	-	-
Rat Genome 230 2.0 Array	1395914_at	-	-
Rat Genome 230 2.0 Array	1370527_a_at	-	-
Rat Genome 230 2.0 Array	1370528_at	-	-
Rat Genome 230 2.0 Array	1373332_at	-	-
Rat Genome 230 2.0 Array	1373332_PM_at	-	-
Rat Genome 230 2.0 Array	1370527_PM_a_at	-	-
Affymetrix HT Rat Focus Array	1370819_PM_at	-	-
Affymetrix HT Rat Focus Array	1395914_PM_at	-	-
Affymetrix HT Rat Focus Array	1370527_a_at	-	-
Affymetrix HT Rat Focus Array	1370528_at	-	-
Affymetrix HT Rat Focus Array	1370527_PM_a_at	-	-
Affymetrix HT Rat Focus Array	1395914_at	-	-
Affymetrix HT Rat Focus Array	1370528_PM_at	-	-
Affymetrix HT Rat Focus Array	1370819_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000039324.rn.1	TC1000004300.rn.1	RTA TC
Rat Expression Set 230	1370819_PM_at	-	-
Rat Expression Set 230	1373332_at	-	-
Rat Expression Set 230	1370528_at	-	-
Rat Expression Set 230	1373332_PM_at	-	-
Rat Expression Set 230	1370528_PM_at	-	-
Rat Expression Set 230	1370527_a_at	-	-
Rat Expression Set 230	1370819_at	-	-
Rat Expression Set 230	1370527_PM_a_at	-	-
Rat Expression Set 230	1395914_PM_at	-	-
Rat Expression Set 230	1395914_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10749742	-	-
Rat Genome U34 Set	L07578_at	-	-
Rat Genome U34 Set	rc_AI013513_at	-	-
Rat Genome U34 Set	rc_AA946432_at	-	-
Rat Genome U34 Set	rc_AI013513_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20732713	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1371863	-	-
RatRef-12 Expression BeadChip	ILMN_57451	-	-