Rn00594589_m1 Best Coverage

• Gene Symbol: Xrcc6
• Gene Name: X-ray repair complementing defective repair in Chinese hamster cells 6
• Gene Aliases: G22p1, Ku70, Kup70
• Chromosome Location: Chr.7: 123259892 - 123280613 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Xrcc6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_139080.2	NP_620780.2	4 - 5	668		62
	XM_008765671.1	XP_008763893.1	4 - 5	661		62
GenBank mRNA	AB066102.1	-	3 - 4	652		62
	BC078718.1	-	4 - 5	668	7115290	62

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700001516.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Xrcc6

Panther Classification:

Molecular Function -

DNA helicase

Gene Ontology Categories:

Process(es)

telomere maintenance
double-strand break repair
double-strand break repair via nonhomologous end joining
cellular response to DNA damage stimulus
brain development
response to ionizing radiation
DNA duplex unwinding
V(D)J recombination
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of neurogenesis
cellular hyperosmotic salinity response
cellular response to X-ray

Function(s)

damaged DNA binding
double-stranded DNA binding
double-stranded telomeric DNA binding
ATP-dependent DNA helicase activity
protein binding
protein C-terminus binding
telomeric DNA binding
transcription regulatory region DNA binding
poly(A) RNA binding
5'-deoxyribose-5-phosphate lyase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P038132	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	62738	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	414603	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	169105	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	199601	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	307368	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	637482	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	327929	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	261915	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	408999	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	883383	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	92936	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	42797	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	853844	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	113501	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	163383	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	665519	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	5654	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	155161	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P038132	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P038132	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P038132	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P527852	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	9486	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	10723	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10898037	-	-
Affymetrix Rat Gene 1.0 ST Array	10898032	-	-
Affymetrix Rat Gene 1.0 ST Array	10898033	-	-
Affymetrix Rat Gene 1.0 ST Array	10898038	-	-
Affymetrix Rat Gene 1.0 ST Array	10898039	-	-
Affymetrix Rat Gene 1.0 ST Array	10898041	-	-
Affymetrix Rat Gene 1.0 ST Array	10898036	-	-
Affymetrix Rat Gene 1.0 ST Array	10898035	-	-
Affymetrix Rat Gene 1.0 ST Array	10898034	-	-
Affymetrix Rat Gene 1.0 ST Array	10898031	-	-
Affymetrix Rat Gene 1.0 ST Array	10898030	-	-
Affymetrix Rat Gene 1.0 ST Array	10898040	-	-
Affymetrix Rat Gene 1.1 ST Array	10898029	-	-
Rat Genome 230 2.0 Array	1370537_at	-	-
Rat Genome 230 2.0 Array	1370537_PM_at	-	-
Affymetrix HT Rat Focus Array	1370537_PM_at	-	-
Affymetrix HT Rat Focus Array	1370537_at	-	-
Affymetrix Rat Clariom S Assay	PSR0700011547.rn.1	TC0700001516.rn.1	RTA TC
Rat Expression Set 230	1370537_PM_at	-	-
Rat Expression Set 230	1370537_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10898029	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21871896	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1349513	-	-
RatRef-12 Expression BeadChip	ILMN_57099	-	-