Rn00594733_m1 Best Coverage

• Gene Symbol: Atp5e
• Gene Name: ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
• Gene Aliases: -
• Chromosome Location: Chr.3: 172563105 - 172566007 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Atp5e
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_139099.1	NP_620799.1	2 - 3	227		72
GenBank mRNA	AF010323.1	-	2 - 3	227		72
	BC058133.1	-	2 - 3	217	6887013	72
	FQ211630.1	-	2 - 3	249		72
	FQ211898.1	-	2 - 3	261		72
	FQ214112.1	-	2 - 3	249		72
	FQ214935.1	-	2 - 3	252		72
	FQ215084.1	-	2 - 3	179		72
	FQ216950.1	-	2 - 3	249		72
	FQ217027.1	-	2 - 3	213		72
	FQ217160.1	-	2 - 3	203		72
	FQ217559.1	-	2 - 3	202		72
	FQ217635.1	-	2 - 3	208		72
	FQ218023.1	-	2 - 3	208		72
	FQ218046.1	-	2 - 3	208		72
	FQ222358.1	-	2 - 3	236		72
	FQ223590.1	-	2 - 3	261		72
	FQ223710.1	-	2 - 3	208		72
	FQ223763.1	-	2 - 3	249		72
	FQ223794.1	-	2 - 3	254		72
	FQ223992.1	-	2 - 3	231		72
	FQ224189.1	-	2 - 3	252		72
	FQ224205.1	-	2 - 3	252		72
	FQ224455.1	-	2 - 3	251		72
	FQ224486.1	-	2 - 3	208		72
	FQ224608.1	-	2 - 3	249		72
	FQ224652.1	-	2 - 3	213		72
	FQ224692.1	-	2 - 3	209		72

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300004971.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Transporter, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Atp5e

Panther Classification:

Molecular Function -

ATP synthase

Gene Ontology Categories:

Process(es)

ATP synthesis coupled proton transport
ATP metabolic process

Function(s)

ATPase activity
proton-transporting ATP synthase activity, rotational mechanism
proton-transporting ATPase activity, rotational mechanism

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P780997	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P780997	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P780997	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P780997	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P780997	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700539888	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	38850	-	-
Agilent Rat cDNA Microarray (G4105A)	700539888	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10773637	-	-
Affymetrix Rat Gene 1.1 ST Array	10773636	-	-
Rat Genome 230 2.0 Array	1370284_PM_at	-	-
Rat Genome 230 2.0 Array	1370284_at	-	-
Affymetrix HT Rat Focus Array	1370284_at	-	-
Affymetrix HT Rat Focus Array	1370284_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300037803.rn.1	TC0300004971.rn.1	RTA TC
Rat Expression Set 230	1370284_PM_at	-	-
Rat Expression Set 230	1370284_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10773636	-	-
Rat Genome U34 Set	rc_AI171844_at	-	-
Rat Genome U34 Set	rc_AI171844_g_at	-	-
Rat Genome U34 Set	rc_AI009382_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20918257	-	-