Rn00595020_m1 Best Coverage

• Gene Symbol: Pomc
• Gene Name: proopiomelanocortin
• Gene Aliases: Pomc1, Pomc2, alphaMSH
• Chromosome Location: Chr.6: 28382949 - 28388769 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pomc
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_139326.2	NP_647542.1	2 - 3	251		92
GenBank mRNA	AF510391.1	-	1 - 2	130		92
	BC058443.1	-	2 - 3	251	6919050	92

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0600000334.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pomc

Gene Ontology Categories:

Process(es)

generation of precursor metabolites and energy
signal transduction
neuropeptide signaling pathway
cell-cell signaling
feeding behavior
regulation of blood pressure
regulation of appetite
negative regulation of tumor necrosis factor production
cellular pigmentation
glucose homeostasis
positive regulation of transcription from RNA polymerase II promoter
regulation of glycogen metabolic process
regulation of corticosterone secretion

Function(s)

G-protein coupled receptor binding
molecular_function
receptor binding
hormone activity
type 3 melanocortin receptor binding
type 4 melanocortin receptor binding
type 1 melanocortin receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P076450	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	602769	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	820997	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	709581	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P076450	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P076450	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P076450	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P13381	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	31990	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10883382	-	-
Affymetrix Rat Gene 1.0 ST Array	10883384	-	-
Affymetrix Rat Gene 1.0 ST Array	10883383	-	-
Affymetrix Rat Gene 1.0 ST Array	10883385	-	-
Affymetrix Rat Gene 1.1 ST Array	10883381	-	-
Rat Genome 230 2.0 Array	1384612_at	-	-
Rat Genome 230 2.0 Array	1384612_PM_at	-	-
Affymetrix HT Rat Focus Array	1384612_at	-	-
Affymetrix HT Rat Focus Array	1384612_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0600002333.rn.1	TC0600000334.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600002335.rn.1	TC0600000334.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600002334.rn.1	TC0600000334.rn.1	RTA TC
Affymetrix Rat Gene 1.0 ST Array	10883381	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21413219	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1371606	-	-
RatRef-12 Expression BeadChip	ILMN_50484	-	-