Rn00595504_m1 Best Coverage

• Gene Symbol: Cxcl9
• Gene Name: chemokine (C-X-C motif) ligand 9
• Gene Aliases: Mig, Scyb9
• Chromosome Location: Chr.14: 17228832 - 17233743 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cxcl9
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_145672.4	NP_663705.1	2 - 3	285		63
GenBank mRNA	AF462610.1	-	2 - 3	192		63
	AF537208.1	-	2 - 3	285		63
	BC087594.1	-		234		63

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1400000253.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Rat Chemokine Panel, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cxcl9

Gene Ontology Categories:

Process(es)

positive regulation of leukocyte chemotaxis
chemotaxis
inflammatory response
immune response
G protein-coupled receptor signaling pathway
T cell chemotaxis
response to lipopolysaccharide
regulation of cell population proliferation
positive regulation of cAMP-mediated signaling
positive regulation of myoblast differentiation
induction of positive chemotaxis
positive regulation of release of sequestered calcium ion into cytosol
defense response to virus
chemokine-mediated signaling pathway
positive regulation of myoblast fusion

Function(s)

chemokine activity
CXCR3 chemokine receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P1043157	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	873323	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	18263	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	262739	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	637684	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1043157	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1043157	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P1043157	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1043157	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	65720	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10771664	-	-
Affymetrix Rat Gene 1.0 ST Array	10771668	-	-
Affymetrix Rat Gene 1.0 ST Array	10771666	-	-
Affymetrix Rat Gene 1.0 ST Array	10771661	-	-
Affymetrix Rat Gene 1.0 ST Array	10771662	-	-
Affymetrix Rat Gene 1.0 ST Array	10771663	-	-
Affymetrix Rat Gene 1.0 ST Array	10771667	-	-
Affymetrix Rat Gene 1.0 ST Array	10771665	-	-
Affymetrix Rat Gene 1.1 ST Array	10771660	-	-
Rat Genome 230 2.0 Array	1373544_PM_at	-	-
Rat Genome 230 2.0 Array	1373544_at	-	-
Rat Genome 230 2.0 Array	1382454_at	-	-
Rat Genome 230 2.0 Array	1382454_PM_at	-	-
Affymetrix HT Rat Focus Array	1373544_PM_at	-	-
Affymetrix HT Rat Focus Array	1382454_at	-	-
Affymetrix HT Rat Focus Array	1382454_PM_at	-	-
Affymetrix HT Rat Focus Array	1373544_at	-	-
Affymetrix Rat Clariom S Assay	PSR1400001983.rn.1	TC1400000253.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400001989.rn.1	TC1400000253.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400001985.rn.1	TC1400000253.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400001986.rn.1	TC1400000253.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400001987.rn.1	TC1400000253.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400001988.rn.1	TC1400000253.rn.1	RTA TC
Rat Expression Set 230	1373544_at	-	-
Rat Expression Set 230	1373544_PM_at	-	-
Rat Expression Set 230	1382454_at	-	-
Rat Expression Set 230	1382454_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10771660	-	-
Rat Genome U34 Set	rc_AA946476_at	-	-
Rat Genome U34 Set	rc_AI044222_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21084110	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1361632	-	-
RatRef-12 Expression BeadChip	ILMN_69223	-	-