Rn00595635_m1 Best Coverage

• Gene Symbol: Lgi1
• Gene Name: leucine-rich, glioma inactivated 1
• Gene Aliases: -
• Chromosome Location: Chr.1: 256955944 - 256996835 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Lgi1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_145769.3	NP_665712.1	7 - 8	836		79
GenBank mRNA	AJ487517.1	-	7 - 8	836		79
	BC089222.1	-	7 - 8	943	7320899	79

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100003566.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Lgi1

Gene Ontology Categories:

Process(es)

axon guidance
positive regulation of cell growth
neuron projection development
positive regulation of synaptic transmission
protein homooligomerization

Function(s)

receptor binding
protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P262122	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	435928	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	638298	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	387741	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	419199	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	560294	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	541799	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	960526	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	714317	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	30697	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	780524	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	963040	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	692777	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	334313	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	10738	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	33970	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	43383	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	44091	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	114132	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	19608	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P262122	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P262122	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P262122	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P262122	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P301922	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	8480	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	60280	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	63383	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10715148	-	-
Affymetrix Rat Gene 1.0 ST Array	10715147	-	-
Affymetrix Rat Gene 1.1 ST Array	10715146	-	-
Rat Genome 230 2.0 Array	1386023_PM_at	-	-
Rat Genome 230 2.0 Array	1386023_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100028945.rn.1	TC0100003566.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100028946.rn.1	TC0100003566.rn.1	RTA TC
Rat Expression Set 230	1386023_at	-	-
Rat Expression Set 230	1386023_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10715146	-	-
Rat Genome U34 Set	rc_AA943229_s_at	-	-
Rat Genome U34 Set	rc_AA943229_r_at	-	-
Rat Genome U34 Set	rc_AI229354_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21677231	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1649734	-	-
RatRef-12 Expression BeadChip	ILMN_57816	-	-