Rn00595671_m1

• Gene Symbol: Nr1d1
• Gene Name: nuclear receptor subfamily 1, group D, member 1
• Gene Aliases: REV-ERBAALPHA
• Chromosome Location: Chr.10: 86683875 - 86690815 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nr1d1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001113422.1	NP_001106893.1	6 - 7	1652		95
	NM_145775.2	NP_665718.2	6 - 7	1622		95
GenBank mRNA	BC062047.1	-	6 - 7	1652	5598020	95
	M25804.1	-	6 - 7	1622		95

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000003722.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Nuclear Receptor, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nr1d1

Panther Classification:

Molecular Function -

C4 zinc finger nuclear receptor, DNA-binding transcription factor, zinc finger transcription factor, gene-specific transcriptional regulator

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
glycogen biosynthetic process
transcription, DNA-templated
regulation of transcription, DNA-templated
circadian rhythm
proteasomal protein catabolic process
negative regulation of receptor biosynthetic process
regulation of lipid metabolic process
cell differentiation
circadian regulation of gene expression
negative regulation of toll-like receptor 4 signaling pathway
regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter
regulation of circadian rhythm
steroid hormone mediated signaling pathway
response to leptin
regulation of fat cell differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
circadian temperature homeostasis
regulation of insulin secretion involved in cellular response to glucose stimulus
regulation of type B pancreatic cell proliferation
positive regulation of bile acid biosynthetic process
cellular response to lipopolysaccharide
regulation of cholesterol homeostasis
positive regulation of cholesterol homeostasis

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
RNA polymerase II core promoter proximal region sequence-specific DNA binding
core promoter sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcription corepressor binding
DNA binding
transcription factor activity, sequence-specific DNA binding
steroid hormone receptor activity
protein binding
zinc ion binding
heme binding
transcription regulatory region DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1000033297.rn.1	TC1000003722.rn.1	RTA TC