Rn00595838_s1 Best Coverage

• Gene Symbol: Socs1
• Gene Name: suppressor of cytokine signaling 1
• Gene Aliases: Cish1, Socs-1
• Chromosome Location: Chr.10: 4956795 - 4958472 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Socs1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_145879.2	NP_665886.2	1	177		76
GenBank mRNA	AW917497.1	-	2	178		76

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000000067.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Socs1

Gene Ontology Categories:

Process(es)

regulation of cytokine production
regulation of protein phosphorylation
negative regulation of protein kinase activity
receptor signaling pathway via JAK-STAT
response to xenobiotic stimulus
regulation of activation of Janus kinase activity
protein ubiquitination
cytokine-mediated signaling pathway
animal organ regeneration
response to estradiol
response to lipopolysaccharide
response to progesterone
response to cytokine
intracellular signal transduction
regulation of growth
regulation of tyrosine phosphorylation of STAT protein
negative regulation of tyrosine phosphorylation of STAT protein
negative regulation of catalytic activity
response to peptide hormone
fat cell differentiation
regulation of receptor signaling pathway via JAK-STAT
negative regulation of receptor signaling pathway via JAK-STAT
negative regulation of insulin receptor signaling pathway
regulation of interferon-gamma-mediated signaling pathway
cellular response to amino acid stimulus

Function(s)

molecular_function
protein kinase inhibitor activity
insulin-like growth factor receptor binding
kinase inhibitor activity
protein kinase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P102369	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P102369	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P102369	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P102369	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P102369	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10731513	-	-
Affymetrix Rat Gene 1.1 ST Array	10731512	-	-
Rat Genome 230 2.0 Array	1371252_at	-	-
Rat Genome 230 2.0 Array	1375568_at	-	-
Rat Genome 230 2.0 Array	1371252_PM_at	-	-
Rat Genome 230 2.0 Array	1375568_PM_at	-	-
Affymetrix HT Rat Focus Array	1375568_PM_at	-	-
Affymetrix HT Rat Focus Array	1375568_at	-	-
Affymetrix HT Rat Focus Array	1371252_PM_at	-	-
Affymetrix HT Rat Focus Array	1371252_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000000674.rn.1	TC1000000067.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000000673.rn.1	TC1000000067.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000000675.rn.1	TC1000000067.rn.1	RTA TC
Rat Expression Set 230	1375568_at	-	-
Rat Expression Set 230	1375568_PM_at	-	-
Rat Expression Set 230	1371252_PM_at	-	-
Rat Expression Set 230	1371252_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10731512	-	-
Rat Genome U34 Set	rc_AI029171_at	-	-
Rat Genome U34 Set	rc_AA849015_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21078402	-	-
ABI Rat Genome Survey Microarray	21408493	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1371295	-	-
RatRef-12 Expression BeadChip	ILMN_50074	-	-