Rn00597273_m1 Best Coverage

• Gene Symbol: Aip
• Gene Name: aryl-hydrocarbon receptor-interacting protein
• Gene Aliases: XAP2
• Chromosome Location: Chr.1: 219361859 - 219373912 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Aip
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_172327.2	NP_758830.2	1 - 2	103		60
	XM_006230699.2	XP_006230761.1	2 - 3	301		60
	XM_006230700.2	XP_006230762.1	2 - 3	270		60
GenBank mRNA	AF543560.1	-	1 - 2	137		60
	BC089110.1	-	1 - 2	103		60
	FQ214270.1	-	1 - 2	211		60
	FQ228146.1	-	1 - 2	131		60

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100007054.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Aip

Gene Ontology Categories:

Process(es)

protein targeting to mitochondrion
xenobiotic metabolic process
regulation of protein kinase A signaling
protein maturation by protein folding
negative regulation of cyclic-nucleotide phosphodiesterase activity
regulation of nucleic acid-templated transcription

Function(s)

transcription coregulator activity
protein binding
aryl hydrocarbon receptor binding
GAF domain binding
unfolded protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P13421	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	606922	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	425773	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	203086	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	228213	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	110421	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	12655	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P13421	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P13421	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P13421	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P13421	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	10647	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10727451	-	-
Affymetrix Rat Gene 1.0 ST Array	10727449	-	-
Affymetrix Rat Gene 1.0 ST Array	10727448	-	-
Affymetrix Rat Gene 1.0 ST Array	10727452	-	-
Affymetrix Rat Gene 1.0 ST Array	10727450	-	-
Affymetrix Rat Gene 1.0 ST Array	10727446	-	-
Affymetrix Rat Gene 1.0 ST Array	10727447	-	-
Affymetrix Rat Gene 1.1 ST Array	10712791	-	-
Affymetrix Rat Gene 1.1 ST Array	10727445	-	-
Rat Genome 230 2.0 Array	1392343_at	-	-
Rat Genome 230 2.0 Array	1388922_at	-	-
Rat Genome 230 2.0 Array	1392343_PM_at	-	-
Rat Genome 230 2.0 Array	1388922_PM_at	-	-
Affymetrix HT Rat Focus Array	1388922_at	-	-
Affymetrix HT Rat Focus Array	1388922_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100056041.rn.1	TC0100007054.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100056042.rn.1	TC0100007054.rn.1	RTA TC
Rat Expression Set 230	1388922_PM_at	-	-
Rat Expression Set 230	1388922_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10727445	-	-
Rat Genome U34 Set	rc_AA963337_at	-	-
Rat Genome U34 Set	rc_AI234785_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21225115	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1367524	-	-
RatRef-12 Expression BeadChip	ILMN_48254	-	-