Rn00597499_m1 Best Coverage

• Gene Symbol: Vimp
• Gene Name: VCP-interacting membrane protein
• Gene Aliases: Sels, sg2
• Chromosome Location: Chr.1: 126979579 - 126989344 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Vimp
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_173120.2	NP_775143.2	2 - 3	240		76
GenBank mRNA	AF367467.1	-	2 - 3	250		76
	BC059111.1	-	2 - 3	244	6920258	76
	FQ210095.1	-	2 - 3	232		76
	FQ218853.1	-	2 - 3	250		76
	FQ219944.1	-	2 - 3	232		76
	FQ220082.1	-	2 - 3	235		76
	FQ225575.1	-	2 - 3	250		76
	FQ229642.1	-	2 - 3	232		76

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100001690.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Vimp

Gene Ontology Categories:

Process(es)

negative regulation of acute inflammatory response to antigenic stimulus
ER overload response
response to glucose
ER-associated ubiquitin-dependent protein catabolic process
endoplasmic reticulum unfolded protein response
retrograde protein transport, ER to cytosol
negative regulation of interleukin-6 production
negative regulation of tumor necrosis factor production
cellular response to oxidative stress
cell redox homeostasis
negative regulation of nitric-oxide synthase biosynthetic process
response to redox state
cellular response to lipopolysaccharide
regulation of nitric oxide metabolic process
negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway
negative regulation of macrophage apoptotic process

Function(s)

selenium binding
antioxidant activity
enzyme binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P106503	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	534973	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	422380	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	905408	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	660275	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	99577	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	842730	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	844967	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	407889	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	217432	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	97878	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P106503	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P106503	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P106503	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P683328	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	28945	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	91297	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10707827	-	-
Affymetrix Rat Gene 1.0 ST Array	10707825	-	-
Affymetrix Rat Gene 1.0 ST Array	10707826	-	-
Affymetrix Rat Gene 1.0 ST Array	10707831	-	-
Affymetrix Rat Gene 1.0 ST Array	10707828	-	-
Affymetrix Rat Gene 1.0 ST Array	10707830	-	-
Affymetrix Rat Gene 1.0 ST Array	10707829	-	-
Affymetrix Rat Gene 1.1 ST Array	10707824	-	-
Rat Genome 230 2.0 Array	1387915_PM_at	-	-
Rat Genome 230 2.0 Array	1387915_at	-	-
Affymetrix HT Rat Focus Array	1387915_PM_at	-	-
Affymetrix HT Rat Focus Array	1387915_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100013616.rn.1	TC0100001690.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100013620.rn.1	TC0100001690.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100013625.rn.1	TC0100001690.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100013618.rn.1	TC0100001690.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100013621.rn.1	TC0100001690.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100013623.rn.1	TC0100001690.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100013622.rn.1	TC0100001690.rn.1	RTA TC
Rat Expression Set 230	1387915_PM_at	-	-
Rat Expression Set 230	1387915_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10707824	-	-
Rat Genome U34 Set	rc_AA997342_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21383553	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1360978	-	-
RatRef-12 Expression BeadChip	ILMN_54948	-	-