Rn00597859_m1 Best Coverage

• Gene Symbol: Chst15
• Gene Name: carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
• Gene Aliases: GalNAc4S6ST, Galnac4s-6st
• Chromosome Location: Chr.1: 204243396 - 204328970 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Chst15
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_173310.3	NP_775432.3	3 - 4	1049		72
	XM_006230430.2	XP_006230492.1	4 - 5	2616		72
	XM_006230431.2	XP_006230493.1	4 - 5	3356		72
	XM_006230433.2	XP_006230495.1	4 - 5	2851		72
	XM_008759868.1	XP_008758090.1	4 - 5	1612		72
	XM_008759869.1	XP_008758091.1	4 - 5	3355		72
GenBank mRNA	AB086953.1	-	3 - 4	1049		72
	BC085687.1	-	3 - 4	1310		72

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100006788.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Chst15

Gene Ontology Categories:

Process(es)

hexose biosynthetic process

Function(s)

3'-phosphoadenosine 5'-phosphosulfate binding
N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P092764	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	903446	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	21365	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	831797	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	155678	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	395302	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	899799	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	98249	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	636169	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	691212	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	6047	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	889633	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	912853	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	735823	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	902148	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	318916	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	135979	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	581972	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	145499	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	968714	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	752762	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	575533	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	175176	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	28179	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	151768	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	167001	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P092764	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P092764	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P092764	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P100054	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P673662	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	76432	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	84210	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	84868	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10726273	-	-
Affymetrix Rat Gene 1.0 ST Array	10726279	-	-
Affymetrix Rat Gene 1.0 ST Array	10726277	-	-
Affymetrix Rat Gene 1.0 ST Array	10726275	-	-
Affymetrix Rat Gene 1.0 ST Array	10726276	-	-
Affymetrix Rat Gene 1.0 ST Array	10726274	-	-
Affymetrix Rat Gene 1.0 ST Array	10726272	-	-
Affymetrix Rat Gene 1.0 ST Array	10726271	-	-
Affymetrix Rat Gene 1.1 ST Array	10726269	-	-
Rat Genome 230 2.0 Array	1378214_at	-	-
Rat Genome 230 2.0 Array	1378214_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100053545.rn.1	TC0100006788.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100053543.rn.1	TC0100006788.rn.1	RTA TC
Rat Expression Set 230	1378214_at	-	-
Rat Expression Set 230	1378214_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10726269	-	-
Rat Genome U34 Set	rc_AI101388_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22084755	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1353568	-	-
RatRef-12 Expression BeadChip	ILMN_67025	-	-