Rn00668519_g1

• Gene Symbol: Nr1h2
• Gene Name: nuclear receptor subfamily 1, group H, member 2
• Gene Aliases: OR-1
• Chromosome Location: Chr.1: 100554577 - 100559896 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nr1h2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031626.1	NP_113814.1	7 - 8	1128		60
GenBank mRNA	BC157812.1	-	7 - 8	1107		60
	U14533.1	-	7 - 8	1128		60
	U20389.1	-	7 - 8	1072		60

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100005355.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Nuclear Receptor, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nr1h2

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
positive regulation of gene expression
negative regulation of gene expression
positive regulation of triglyceride biosynthetic process
positive regulation of cholesterol efflux
positive regulation of lipid storage
negative regulation of cholesterol storage
intracellular receptor signaling pathway
positive regulation of cellular protein metabolic process
negative regulation of lipid transport
positive regulation of cholesterol transport
cholesterol homeostasis
steroid hormone mediated signaling pathway
cellular lipid metabolic process
positive regulation of fatty acid biosynthetic process
negative regulation of proteolysis
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
retinoic acid receptor signaling pathway
negative regulation of pinocytosis
positive regulation of lipoprotein lipase activity
lipid homeostasis
positive regulation of high-density lipoprotein particle assembly
positive regulation of pancreatic juice secretion
positive regulation of secretion of lysosomal enzymes
regulation of cholesterol homeostasis

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
RNA polymerase II transcription factor activity, sequence-specific transcription regulatory region DNA binding
DNA binding
transcription factor activity, sequence-specific DNA binding
steroid hormone receptor activity
RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
protein binding
zinc ion binding
apolipoprotein A-I receptor binding
sequence-specific DNA binding
retinoid X receptor binding
ATPase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0100043237.rn.1	TC0100005355.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100043240.rn.1	TC0100005355.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100043238.rn.1	TC0100005355.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100043242.rn.1	TC0100005355.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100043241.rn.1	TC0100005355.rn.1	RTA TC