Rn00668979_m1

• Gene Symbol: Clns1a
• Gene Name: chloride channel, nucleotide-sensitive, 1A
• Gene Aliases: Clci, Clcni, Icln, pICln
• Chromosome Location: Chr.1: 162676246 - 162696549 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Clns1a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031719.1	NP_113907.1	5 - 6	690		69
	XM_006229792.2	XP_006229854.1	5 - 6	753		69
GenBank mRNA	BC060555.1	-	5 - 6	734	6918578	69
	D13985.1	-	5 - 6	760		69
	D17698.1	-	5 - 6	673		69
	FQ212666.1	-	3 - 4	372		69
	L26450.1	-	5 - 6	690		69

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100002084.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Transporter, 3' Most, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Clns1a

Panther Classification:

Molecular Function -

transporter

Gene Ontology Categories:

Process(es)

spliceosomal snRNP assembly
chloride transport
cell volume homeostasis

Function(s)

poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P235815	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	812299	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	39000	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	168196	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	630798	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	307449	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	947227	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	373415	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	774884	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	859271	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	30507	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	345949	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	685070	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	866606	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	804010	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	21175	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	87579	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P235815	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P235815	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P235815	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P235815	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	17111	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	45028	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	41075	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10708831	-	-
Affymetrix Rat Gene 1.0 ST Array	10708830	-	-
Affymetrix Rat Gene 1.0 ST Array	10708827	-	-
Affymetrix Rat Gene 1.0 ST Array	10708825	-	-
Affymetrix Rat Gene 1.0 ST Array	10708828	-	-
Affymetrix Rat Gene 1.0 ST Array	10708826	-	-
Affymetrix Rat Gene 1.0 ST Array	10708829	-	-
Affymetrix Rat Gene 1.1 ST Array	10708824	-	-
Rat Genome 230 2.0 Array	1367772_at	-	-
Rat Genome 230 2.0 Array	1367772_PM_at	-	-
Affymetrix HT Rat Focus Array	1367772_PM_at	-	-
Affymetrix HT Rat Focus Array	1367772_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100016015.rn.1	TC0100002084.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100016018.rn.1	TC0100002084.rn.1	RTA TC
Rat Expression Set 230	1367772_PM_at	-	-
Rat Expression Set 230	1367772_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10708824	-	-
Rat Genome U34 Set	D13985_at	-	-
Rat Genome U34 Set	D13985_g_at	-	-
Rat Genome U34 Set	D13985_g_at	-	-
Rat Genome U34 Set	D13985_at	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1366686	-	-
RatRef-12 Expression BeadChip	ILMN_60865	-	-