Rn00676307_g1

• Gene Symbol: Smpd2
• Gene Name: sphingomyelin phosphodiesterase 2, neutral membrane
• Gene Aliases: nSMase
• Chromosome Location: Chr.20: 46212070 - 46215236 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Smpd2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031360.2	NP_112650.1	8 - 9	990		69
	XM_008773007.1	XP_008771229.1	9 - 10	927		69
GenBank mRNA	AB047002.1	-	8 - 9	729		69
	BC091139.1	-	8 - 9	990		69

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000001701.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Rat Phosphodiesterase, 1700, Inventoried, Rat Phosphodiesterase, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Smpd2

Gene Ontology Categories:

Process(es)

response to mechanical stimulus
intracellular signal transduction
ceramide biosynthetic process

Function(s)

sphingomyelin phosphodiesterase activity
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P265965	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	49443	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	181701	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P265965	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P265965	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P265965	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P265965	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	12662	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10833716	-	-
Affymetrix Rat Gene 1.0 ST Array	10833715	-	-
Affymetrix Rat Gene 1.0 ST Array	10833717	-	-
Affymetrix Rat Gene 1.0 ST Array	10833719	-	-
Affymetrix Rat Gene 1.0 ST Array	10830545	-	-
Affymetrix Rat Gene 1.0 ST Array	10833720	-	-
Affymetrix Rat Gene 1.0 ST Array	10833721	-	-
Affymetrix Rat Gene 1.0 ST Array	10833718	-	-
Affymetrix Rat Gene 1.0 ST Array	10833714	-	-
Affymetrix Rat Gene 1.0 ST Array	10833723	-	-
Affymetrix Rat Gene 1.0 ST Array	10833724	-	-
Affymetrix Rat Gene 1.0 ST Array	10833722	-	-
Affymetrix Rat Gene 1.1 ST Array	10833713	-	-
Rat Genome 230 2.0 Array	1370049_at	-	-
Rat Genome 230 2.0 Array	1370049_PM_at	-	-
Affymetrix HT Rat Focus Array	1370049_at	-	-
Affymetrix HT Rat Focus Array	1370049_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR2000013793.rn.1	TC2000001701.rn.1	RTA TC
Rat Expression Set 230	1370049_at	-	-
Rat Expression Set 230	1370049_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10833713	-	-
Rat Genome U34 Set	rc_AI176647_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21615452	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1365029	-	-
RatRef-12 Expression BeadChip	ILMN_70152	-	-