Rn00676880_m1

• Gene Symbol: Trpv1
• Gene Name: transient receptor potential cation channel, subfamily V, member 1
• Gene Aliases: TRPV1_SON, VR.5'sv, Vr1, Vr1l1
• Chromosome Location: Chr.10: 59799123 - 59824677 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Trpv1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031982.1	NP_114188.1	12 - 13	1862		76
	XM_008767882.1	XP_008766104.1	11 - 12	1869		76
GenBank mRNA	AB015231.3	-		1113		76
	AB040873.1	-	11 - 12	1782		76
	AB041029.1	-	10 - 11	1602		76
	AF029310.1	-	12 - 13	1862		76
	AF158248.2	-	6 - 7	1195		76
	LC008303.1	-	7 - 8	1102		76

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000001025.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Ion Channel, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Trpv1

Panther Classification:

Molecular Function -

ion channel

Gene Ontology Categories:

Process(es)

temperature homeostasis
fever generation
microglial cell activation
diet induced thermogenesis
peptide secretion
lipid metabolic process
calcium ion transport
inflammatory response
signal transduction
positive regulation of cytosolic calcium ion concentration
response to pH
response to heat
response to organonitrogen compound
glutamate secretion
urinary bladder smooth muscle contraction
sensory perception of pain
ion transmembrane transport
positive regulation of apoptotic process
response to peptide hormone
positive regulation of nitric oxide biosynthetic process
response to pain
behavioral response to pain
sensory perception of mechanical stimulus
thermoception
detection of chemical stimulus involved in sensory perception of pain
smooth muscle contraction involved in micturition
positive regulation of gastric acid secretion
calcium ion transmembrane transport
cellular response to alkaloid
cellular response to ATP
cellular response to cytokine stimulus
cellular response to tumor necrosis factor
cellular response to growth factor stimulus
cellular response to temperature stimulus
negative regulation of establishment of blood-brain barrier
cellular response to nerve growth factor stimulus

Function(s)

transmembrane signaling receptor activity
ion channel activity
excitatory extracellular ligand-gated ion channel activity
cation channel activity
calcium channel activity
protein binding
calmodulin binding
ATP binding
cation transmembrane transporter activity
ligand-gated ion channel activity
calcium-release channel activity
chloride channel regulator activity
identical protein binding
phosphoprotein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1000009382.rn.1	TC1000001025.rn.1	RTA TC