Rn00679297_g1 Best Coverage

• Gene Symbol: Daxx
• Gene Name: death-domain associated protein
• Gene Aliases: -
• Chromosome Location: Chr.20: 5480103 - 5485957 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Daxx
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_080891.2	NP_543167.2	2 - 3	297		78
	XM_006256103.2	XP_006256165.1	2 - 3	1079		78
	XM_006256104.2	XP_006256166.1	2 - 3	753		78
	XM_006256105.2	XP_006256167.1	2 - 3	649		78
	XM_006256106.2	XP_006256168.1	2 - 3	315		78
	XM_006256107.2	XP_006256169.1	2 - 3	419		78
	XM_006256108.2	XP_006256170.1	2 - 3	299		78
	XM_006256109.1	XP_006256171.1	1 - 2	1172		78
	XM_006256110.2	XP_006256172.1	2 - 3	298		78
	XM_008772704.1	XP_008770926.1	1 - 2	1172		78
GenBank mRNA	AB064671.1	-	1 - 2	201		78
	BC128729.1	-	2 - 3	297		78
	FQ223571.1	-	2 - 3	268		78

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000001128.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Daxx

Gene Ontology Categories:

Process(es)

negative regulation of transcription by RNA polymerase II
mitotic cytokinesis
positive regulation of protein phosphorylation
chromatin organization
nucleosome assembly
chromatin remodeling
transcription, DNA-templated
regulation of transcription, DNA-templated
apoptotic process
response to metal ion
negative regulation of myotube differentiation
androgen receptor signaling pathway
PML body organization
regulation of protein ubiquitination
positive regulation of histone phosphorylation
positive regulation of apoptotic process
positive regulation of protein kinase activity
negative regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
cellular response to tumor necrosis factor
cellular response to anoxia
apoptotic signaling pathway
positive regulation of neuron death
positive regulation of apoptotic signaling pathway

Function(s)

p53 binding
transcription coactivator activity
transcription corepressor activity
protein binding
transcription factor binding
enzyme binding
protein kinase binding
protein kinase activator activity
ubiquitin protein ligase binding
histone binding
protein homodimerization activity
protein N-terminus binding
androgen receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR2000009577.rn.1	TC2000001128.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000009576.rn.1	TC2000001128.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000009578.rn.1	TC2000001128.rn.1	RTA TC