Rn00679622_m1

• Gene Symbol: Runx3
• Gene Name: runt-related transcription factor 3
• Gene Aliases: -
• Chromosome Location: Chr.5: 153507093 - 153531137 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Runx3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_130425.1	NP_569109.1	4 - 5	694		103
GenBank mRNA	AF421886.1	-	4 - 5	694		103
	FQ230848.1	-		443		103

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500001673.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Rattus norvegicus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Runx3

Panther Classification:

Molecular Function -

Runt transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
chondrocyte differentiation
regulation of transcription, DNA-templated
protein phosphorylation
axon guidance
biological_process
hair follicle morphogenesis
neuron projection development
interferon-gamma production
mRNA transcription from RNA polymerase II promoter
negative regulation of cell cycle
cell maturation
negative regulation of epithelial cell proliferation
positive regulation of extrinsic apoptotic signaling pathway

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
molecular_function
DNA binding
transcription factor activity, sequence-specific DNA binding
ATP binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P051318	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	18911	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	125931	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	819572	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	346637	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	497708	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	827821	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	798032	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	555638	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	413449	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	801794	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	722566	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	72217	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	116891	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	838124	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	717204	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	182083	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	199263	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	957831	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	897071	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	200230	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	141774	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	167472	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P051317	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P051317	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P051317	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P13119	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	8148	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	53459	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10872848	-	-
Affymetrix Rat Gene 1.0 ST Array	10872849	-	-
Affymetrix Rat Gene 1.0 ST Array	10872847	-	-
Affymetrix Rat Gene 1.0 ST Array	10872845	-	-
Affymetrix Rat Gene 1.0 ST Array	10872846	-	-
Affymetrix Rat Gene 1.1 ST Array	10872843	-	-
Rat Genome 230 2.0 Array	1387479_PM_at	-	-
Rat Genome 230 2.0 Array	1390946_PM_at	-	-
Rat Genome 230 2.0 Array	1390946_at	-	-
Rat Genome 230 2.0 Array	1387479_at	-	-
Affymetrix HT Rat Focus Array	1387479_PM_at	-	-
Affymetrix HT Rat Focus Array	1387479_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500012085.rn.1	TC0500001673.rn.1	RTA TC
Rat Expression Set 230	1387479_at	-	-
Rat Expression Set 230	1387479_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10872843	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21661582	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1372259	-	-
RatRef-12 Expression BeadChip	ILMN_54863	-	-