Rn00681245_m1

• Gene Symbol: Ctsh
• Gene Name: cathepsin H
• Gene Aliases: -
• Chromosome Location: Chr.8: 97439153 - 97458293 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ctsh
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012939.1	NP_037071.1	1 - 2	86		87
	XM_008766440.1	XP_008764662.1	1 - 2	137		87
GenBank mRNA	BC085352.1	-	1 - 2	101	7115929	87
	FQ210730.1	-	1 - 2	96		87
	FQ219177.1	-	1 - 2	96		87
	FQ219281.1	-	1 - 2	96		87
	FQ219285.1	-	1 - 2	96		87
	FQ219548.1	-	1 - 2	96		87
	FQ219611.1	-	1 - 2	114		87
	FQ223707.1	-	1 - 2	92		87
	FQ228906.1	-	1 - 2	103		87
	FQ228938.1	-	1 - 2	93		87
	FQ228956.1	-	1 - 2	123		87
	M38135.1	-	1 - 2	81		87
	Y00708.1	-	1 - 2	86		87

More Information

Additional Information:

This assay is in the 5'UTR region of the M38135.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Protease, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ctsh

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

metanephros development
T cell mediated cytotoxicity
adaptive immune response
immune response-regulating signaling pathway
proteolysis
apoptotic process
activation of cysteine-type endopeptidase activity involved in apoptotic process
spermatogenesis
positive regulation of cell proliferation
positive regulation of gene expression
positive regulation of epithelial cell migration
neuropeptide catabolic process
bradykinin catabolic process
positive regulation of peptidase activity
positive regulation of cell migration
zymogen activation
protein destabilization
response to retinoic acid
membrane protein proteolysis
negative regulation of apoptotic process
surfactant homeostasis
positive regulation of angiogenesis
dichotomous subdivision of terminal units involved in lung branching
ERK1 and ERK2 cascade
cellular response to thyroid hormone stimulus
positive regulation of apoptotic signaling pathway

Function(s)

endopeptidase activity
aminopeptidase activity
cysteine-type endopeptidase activity
serine-type endopeptidase activity
peptidase activity
cysteine-type peptidase activity
cysteine-type endopeptidase activator activity involved in apoptotic process
peptidase activator activity involved in apoptotic process
HLA-A specific activating MHC class I receptor activity
kininogen binding
protein complex binding
protein self-association
thyroid hormone binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0800009308.rn.1	TC0800001277.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800009310.rn.1	TC0800001277.rn.1	RTA TC