Rn00688647_g1

• Gene Symbol: Hnf1a
• Gene Name: HNF1 homeobox A
• Gene Aliases: HNF1, LF-B1, Lfb1, Tcf1
• Chromosome Location: Chr.12: 47407811 - 47433342 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Hnf1a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012669.1	NP_036801.1	5 - 6	1258		127
GenBank mRNA	J03170.1	-	5 - 6	1258		127
	X53297.1	-	4 - 5	616		127
	X54423.1	-	5 - 6	1108		127

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200000789.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Hnf1a

Gene Ontology Categories:

Process(es)

negative regulation of transcription by RNA polymerase II
blastocyst development
liver development
placenta development
chromatin remodeling
regulation of transcription, DNA-templated
regulation of transcription by RNA polymerase II
transcription by RNA polymerase II
fatty acid biosynthetic process
bile acid biosynthetic process
heme biosynthetic process
response to oxidative stress
protein localization
cholesterol metabolic process
response to glucose
bile acid and bile salt transport
fatty acid transport
insulin secretion
regulation of Wnt signaling pathway
embryonic limb morphogenesis
endocrine pancreas development
regulation of pronephros size
renal glucose absorption
glucose homeostasis
reverse cholesterol transport
bone resorption
positive regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
glucose import
regulation of hormone secretion
paraxial mesoderm formation
reproductive structure development
regulation of insulin secretion
positive regulation of transcription initiation from RNA polymerase II promoter
SMAD protein signal transduction

Function(s)

transcription cis-regulatory region binding
RNA polymerase II core promoter sequence-specific DNA binding
transcription coregulator binding
DNA-binding transcription activator activity, RNA polymerase II-specific
DNA binding
double-stranded DNA binding
DNA-binding transcription factor activity
protein binding
transcription factor binding
protein homodimerization activity
sequence-specific DNA binding
protein heterodimerization activity
protein dimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1200006942.rn.1	TC1200000789.rn.1	RTA TC