Rn00692873_m1

• Gene Symbol: Rnf4
• Gene Name: ring finger protein 4
• Gene Aliases: -
• Chromosome Location: Chr.14: 81658400 - 81679679 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rnf4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_019182.2	NP_062055.1	2 - 3	281		123
	XM_008770271.1	XP_008768493.1	2 - 3	313		123
	XM_008770272.1	XP_008768494.1	2 - 3	268		123
	XM_008770273.1	XP_008768495.1	2 - 3	401		123
GenBank mRNA	AF022081.1	-	2 - 3	199		123
	AY050655.1	-	2 - 3	293		123
	BC062024.1	-	2 - 3	281		123
	FQ211855.1	-	1 - 2	163		123
	FQ223606.1	-	2 - 3	297		123

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1400002094.rn.1

Additional Information:

This assay is in the 5'UTR region of the AF022081.1, AY050655.1, BC062024.1, NM_019182.2, XM_008770271.1, XM_008770272.1, XM_008770273.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rnf4

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
protein ubiquitination
proteasome-mediated ubiquitin-dependent protein catabolic process
positive regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
response to arsenic-containing substance
protein autoubiquitination
negative regulation of cell death
protein K63-linked ubiquitination
protein K48-linked ubiquitination
protein K11-linked ubiquitination
cellular response to gamma radiation
cellular response to hydroxyurea
protein K6-linked ubiquitination
regulation of spindle assembly
regulation of kinetochore assembly

Function(s)

DNA binding
ubiquitin-protein transferase activity
protein binding
transcription factor binding
zinc ion binding
ligase activity
TBP-class protein binding
estrogen receptor binding
nucleosome binding
SUMO polymer binding
progesterone receptor binding
identical protein binding
androgen receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1400015097.rn.1	TC1400002094.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400015099.rn.1	TC1400002094.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400015106.rn.1	TC1400002094.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400015098.rn.1	TC1400002094.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400015109.rn.1	TC1400002094.rn.1	RTA TC