Rn00709363_m1 Best Coverage

• Gene Symbol: Pdgfa
• Gene Name: platelet-derived growth factor alpha polypeptide
• Gene Aliases: PDGFACP
• Chromosome Location: Chr.12: 17732358 - 17756186 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pdgfa
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012801.1	NP_036933.1	4 - 5	647		62
	XM_006248918.2	XP_006248980.1	2 - 3	629		62
	XM_006248919.2	XP_006248981.1	2 - 3	629		62
	XM_008768940.1	XP_008767162.1	3 - 4	2228		62
GenBank mRNA	BC061731.1	-	2 - 3	634	5598667	62
	D10106.1	-	2 - 3	206		62
	L06238.1	-	4 - 5	647		62
	L06894.1	-	3 - 4	291		62
	Z14120.1	-	2 - 3	141		62

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200000309.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pdgfa

Panther Classification:

Molecular Function -

growth factor

Gene Ontology Categories:

Process(es)

angiogenesis
response to hypoxia
hair follicle development
positive regulation of mesenchymal cell proliferation
transforming growth factor beta receptor signaling pathway
blood coagulation
positive regulation of cell proliferation
response to wounding
organ morphogenesis
response to organic substance
response to inorganic substance
negative regulation of phosphatidylinositol biosynthetic process
negative regulation of platelet activation
positive regulation of phosphatidylinositol 3-kinase signaling
regulation of smooth muscle cell migration
cell projection assembly
actin cytoskeleton organization
positive regulation of cell migration
positive regulation of protein autophosphorylation
response to estradiol
response to retinoic acid
positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway
wound healing
response to drug
positive regulation of MAP kinase activity
positive regulation of MAPK cascade
skin development
positive regulation of DNA replication
platelet-derived growth factor receptor signaling pathway
positive regulation of fibroblast proliferation
lung alveolus development
digestive tract development
inner ear development
regulation of peptidyl-tyrosine phosphorylation
negative chemotaxis
positive regulation of cell division
positive regulation of protein kinase B signaling
regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signaling
positive regulation of ERK1 and ERK2 cascade
regulation of glomerular mesangial cell proliferation
embryonic lung development
regulation of DNA biosynthetic process

Function(s)

platelet-derived growth factor receptor binding
collagen binding
growth factor activity
protein homodimerization activity
protein heterodimerization activity
platelet-derived growth factor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1200002399.rn.1	TC1200000309.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200002398.rn.1	TC1200000309.rn.1	RTA TC