Rn00709396_g1 Best Coverage

• Gene Symbol: Bckdk
• Gene Name: branched chain ketoacid dehydrogenase kinase
• Gene Aliases: -
• Chromosome Location: Chr.1: 199351628 - 199356299 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Bckdk
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_019244.2	NP_062117.2	10 - 11	1355		77
GenBank mRNA	BM392152.1	-	1 - 2			77
	M93271.1	-		1220		77
	U27456.1	-	9 - 10	1009		77

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100002668.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Protein Kinase, 3' Most, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Bckdk

Panther Classification:

Molecular Function -

non-receptor serine/threonine protein kinase

Gene Ontology Categories:

Process(es)

protein phosphorylation
branched-chain amino acid catabolic process
phosphorylation

Function(s)

protein kinase activity
protein serine/threonine kinase activity
ATP binding
[3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P834903	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	410393	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	411632	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	790852	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P834903	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P834903	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P834903	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P100318	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	27863	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10711240	-	-
Affymetrix Rat Gene 1.0 ST Array	10711241	-	-
Affymetrix Rat Gene 1.0 ST Array	10711243	-	-
Affymetrix Rat Gene 1.0 ST Array	10711236	-	-
Affymetrix Rat Gene 1.0 ST Array	10711239	-	-
Affymetrix Rat Gene 1.0 ST Array	10711244	-	-
Affymetrix Rat Gene 1.0 ST Array	10711237	-	-
Affymetrix Rat Gene 1.0 ST Array	10711242	-	-
Affymetrix Rat Gene 1.0 ST Array	10711235	-	-
Affymetrix Rat Gene 1.0 ST Array	10711238	-	-
Affymetrix Rat Gene 1.1 ST Array	10711234	-	-
Rat Genome 230 2.0 Array	1370842_at	-	-
Rat Genome 230 2.0 Array	1370842_PM_at	-	-
Affymetrix HT Rat Focus Array	1370842_PM_at	-	-
Affymetrix HT Rat Focus Array	1370842_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100020776.rn.1	TC0100002668.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100020774.rn.1	TC0100002668.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100020777.rn.1	TC0100002668.rn.1	RTA TC
Rat Expression Set 230	1370842_PM_at	-	-
Rat Expression Set 230	1370842_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10711234	-	-
Rat Genome U34 Set	M93271_at	-	-
Rat Genome U34 Set	rc_AI008283_s_at	-	-
Rat Genome U34 Set	rc_AI237354_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21530930	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376775	-	-