Rn00709616_m1

• Gene Symbol: Tap1
• Gene Name: transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
• Gene Aliases: Abcb2, Cim, Tap2
• Chromosome Location: Chr.20: 3979302 - 3989669 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tap1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_032055.4	NP_114444.2	4 - 5	1038		78
GenBank mRNA	BC101854.1	-	4 - 5	1305	7933924	78
	KC222902.1	-	4 - 5	979		78
	KC222903.1	-	4 - 5	979		78
	KC222905.1	-	4 - 5	796		78
	KC222906.1	-	4 - 5	979		78
	X57523.1	-	4 - 5	1026		78
	Y10230.1	-	4 - 5	979		78
	Y10231.1	-	4 - 5	979		78
	Y10232.1	-	4 - 5	979		78
	Y10233.1	-	4 - 5	979		78
	Y10234.1	-	4 - 5	979		78
	Y10235.1	-	4 - 5	979		78

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000000131.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Transporter, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tap1

Panther Classification:

Molecular Function -

ATP-binding cassette (ABC) transporter

Gene Ontology Categories:

Process(es)

defense response
metabolic process
protein transport
peptide transport
intracellular transport of viral protein in host cell
antigen processing and presentation of endogenous peptide antigen via MHC class I
protection from natural killer cell mediated cytotoxicity
cytosol to ER transport
peptide antigen transport
transmembrane transport

Function(s)

nucleotide binding
ATP binding
peptide transporter activity
peptide antigen-transporting ATPase activity
peptide-transporting ATPase activity
ATPase activity
MHC class Ib protein binding
MHC class I protein binding
peptide antigen binding
ATPase activity, coupled to transmembrane movement of substances
protein homodimerization activity
ADP binding
TAP1 binding
TAP2 binding
tapasin binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR2000001039.rn.1	TC2000000131.rn.1	RTA TC