Rn00709933_m1 Best Coverage

• Gene Symbol: Arfgap1
• Gene Name: ADP-ribosylation factor GTPase activating protein 1
• Gene Aliases: Arf GAP1, Arf1gap
• Chromosome Location: Chr.3: 176475847 - 176491198 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Arfgap1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_145090.3	NP_659558.1	8 - 9	912		59
	XM_006235731.2	XP_006235793.1	8 - 9	1012		59
	XM_006235732.1	XP_006235794.1	8 - 9	953		59
	XM_006235733.2	XP_006235795.1	7 - 8	1221		59
	XM_006235734.2	XP_006235796.1	7 - 8	1220		59
GenBank mRNA	BC070895.1	-	8 - 9	893	7099840	59
	DQ167810.1	-	6 - 7	629		59
	DQ167811.1	-	6 - 7	629		59
	FQ222295.1	-	8 - 9	935		59
	FQ232032.1	-	8 - 9	933		59
	FQ233265.1	-	8 - 9	933		59
	U35776.1	-	8 - 9	912		59

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300002587.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Arfgap1

Panther Classification:

Molecular Function -

G-protein modulator, protein-binding activity modulator, GTPase-activating protein

Gene Ontology Categories:

Process(es)

protein transport
vesicle-mediated transport
regulation of endocytosis
positive regulation of GTPase activity

Function(s)

GTPase activator activity
protein binding
zinc ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P058757	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P010224	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	643029	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	859125	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	802399	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	316545	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	910823	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	233915	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	663569	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	608238	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	22795	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	157664	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	80623	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P010224	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P058757	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P058757	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P010224	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P058757	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P010224	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P13406	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1037796	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700912927	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	76803	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	2892	-	-
Agilent Rat cDNA Microarray (G4105A)	700912927	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10842917	-	-
Affymetrix Rat Gene 1.0 ST Array	10842916	-	-
Affymetrix Rat Gene 1.0 ST Array	10842907	-	-
Affymetrix Rat Gene 1.0 ST Array	10842919	-	-
Affymetrix Rat Gene 1.0 ST Array	10842908	-	-
Affymetrix Rat Gene 1.0 ST Array	10842914	-	-
Affymetrix Rat Gene 1.0 ST Array	10842910	-	-
Affymetrix Rat Gene 1.0 ST Array	10842904	-	-
Affymetrix Rat Gene 1.0 ST Array	10842918	-	-
Affymetrix Rat Gene 1.0 ST Array	10842915	-	-
Affymetrix Rat Gene 1.0 ST Array	10842911	-	-
Affymetrix Rat Gene 1.0 ST Array	10842912	-	-
Affymetrix Rat Gene 1.0 ST Array	10842913	-	-
Affymetrix Rat Gene 1.0 ST Array	10842909	-	-
Affymetrix Rat Gene 1.1 ST Array	10842903	-	-
Rat Genome 230 2.0 Array	1389492_at	-	-
Rat Genome 230 2.0 Array	1376123_PM_at	-	-
Rat Genome 230 2.0 Array	1384951_PM_at	-	-
Rat Genome 230 2.0 Array	1376123_at	-	-
Rat Genome 230 2.0 Array	1370364_at	-	-
Rat Genome 230 2.0 Array	1384951_at	-	-
Rat Genome 230 2.0 Array	1370364_PM_at	-	-
Rat Genome 230 2.0 Array	1389492_PM_at	-	-
Affymetrix HT Rat Focus Array	1370364_at	-	-
Affymetrix HT Rat Focus Array	1376123_at	-	-
Affymetrix HT Rat Focus Array	1376123_PM_at	-	-
Affymetrix HT Rat Focus Array	1370364_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300019051.rn.1	TC0300002587.rn.1	RTA TC
Rat Expression Set 230	1389492_at	-	-
Rat Expression Set 230	1370364_PM_at	-	-
Rat Expression Set 230	1376123_PM_at	-	-
Rat Expression Set 230	1370364_at	-	-
Rat Expression Set 230	1376123_at	-	-
Rat Expression Set 230	1389492_PM_at	-	-
Rat Expression Set 230	1384951_PM_at	-	-
Rat Expression Set 230	1384951_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10842903	-	-
Rat Genome U34 Set	U35776_at	-	-
Rat Genome U34 Set	rc_AA818820_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21789423	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1370142	-	-
RatRef-12 Expression BeadChip	ILMN_49323	-	-