Rn00709981_m1

• Gene Symbol: Sqstm1
• Gene Name: sequestosome 1
• Gene Aliases: Osi, ZIP, ZIP3
• Chromosome Location: Chr.10: 35704728 - 35716316 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sqstm1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_175843.4	NP_787037.2	5 - 6	773		113
	XM_006246214.2	XP_006246276.1	5 - 6	795		113
GenBank mRNA	BC061575.1	-	5 - 6	777	6887571	113
	Y08355.1	-	5 - 6	802		113

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000002704.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sqstm1

Gene Ontology Categories:

Process(es)

positive regulation of protein phosphorylation
immune system process
ubiquitin-dependent protein catabolic process
autophagy
apoptotic process
macroautophagy
positive regulation of macroautophagy
cell differentiation
regulation of I-kappaB kinase/NF-kappaB signaling
protein heterooligomerization
regulation of mitophagy

Function(s)

protein kinase C binding
protein binding
zinc ion binding
protein kinase binding
SH2 domain binding
identical protein binding
protein homodimerization activity
ubiquitin binding
K63-linked polyubiquitin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1000023852.rn.1	TC1000002704.rn.1	RTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21317576	-	-