Rn00710603_m1 Best Coverage

• Gene Symbol: Tnfsf9
• Gene Name: tumor necrosis factor (ligand) superfamily, member 9
• Gene Aliases: -
• Chromosome Location: Chr.9: 9909942 - 9912276 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tnfsf9
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_181384.2	NP_852049.1	2 - 3	566		62
GenBank mRNA	AY259541.1	-	2 - 3	566		62

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0900001448.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tnfsf9

Gene Ontology Categories:

Process(es)

immune response
positive regulation of interferon-gamma production
positive regulation of interleukin-12 production
positive regulation of interleukin-6 production
positive regulation of activated T cell proliferation
regulation of cell proliferation
myeloid dendritic cell differentiation
positive regulation of cytotoxic T cell differentiation

Function(s)

molecular_function
receptor binding
cytokine activity
tumor necrosis factor receptor binding
tumor necrosis factor receptor superfamily binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P1004840	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1004840	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1004840	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P1004840	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1004840	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10940589	-	-
Affymetrix Rat Gene 1.1 ST Array	10940589	-	-
Rat Genome 230 2.0 Array	1377554_PM_at	-	-
Rat Genome 230 2.0 Array	1377554_at	-	-
Affymetrix HT Rat Focus Array	1377554_at	-	-
Affymetrix HT Rat Focus Array	1377554_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0900011950.rn.1	TC0900001448.rn.1	RTA TC
Rat Expression Set 230	1377554_PM_at	-	-
Rat Expression Set 230	1377554_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10940589	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21603216	-	-