Rn00711083_m1 Best Coverage

• Gene Symbol: Rnasel
• Gene Name: ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)
• Gene Aliases: -
• Chromosome Location: Chr.13: 71188717 - 71202636 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rnasel
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_182673.2	NP_872614.1	2 - 3	1607		90
	XM_006249998.2	XP_006250060.1	4 - 5	1994		90
	XM_006249999.2	XP_006250061.1	4 - 5	2198		90
	XM_006250000.2	XP_006250062.1	4 - 5	2284		90
	XM_006250001.2	XP_006250063.1	4 - 5	1973		90
	XM_006250002.2	XP_006250064.1	3 - 4	2049		90
	XM_006250004.2	XP_006250066.1	3 - 4	2561		90
	XM_008769653.1	XP_008767875.1	3 - 4	2561		90
GenBank mRNA	AY262823.1	-	2 - 3	1609		90

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1300000501.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rnasel

Gene Ontology Categories:

Process(es)

rRNA processing
mRNA processing
protein phosphorylation
regulation of mRNA stability
negative regulation of viral genome replication
fat cell differentiation
positive regulation of transcription from RNA polymerase II promoter
defense response to virus
RNA phosphodiester bond hydrolysis
positive regulation of glucose import in response to insulin stimulus

Function(s)

RNA binding
ribonuclease activity
protein kinase activity
ATP binding
rRNA binding
ribonucleoprotein complex binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P160846	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	481481	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	151259	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	289578	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	237494	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	513601	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	19086	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P160846	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P160846	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P160846	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P160846	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	73149	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10764783	-	-
Affymetrix Rat Gene 1.0 ST Array	10764784	-	-
Affymetrix Rat Gene 1.0 ST Array	10764782	-	-
Affymetrix Rat Gene 1.0 ST Array	10764787	-	-
Affymetrix Rat Gene 1.0 ST Array	10764785	-	-
Affymetrix Rat Gene 1.0 ST Array	10764786	-	-
Affymetrix Rat Gene 1.1 ST Array	10764781	-	-
Rat Genome 230 2.0 Array	1380425_at	-	-
Rat Genome 230 2.0 Array	1380425_PM_at	-	-
Rat Genome 230 2.0 Array	1377116_at	-	-
Rat Genome 230 2.0 Array	1377116_PM_at	-	-
Affymetrix HT Rat Focus Array	1380425_PM_at	-	-
Affymetrix HT Rat Focus Array	1377116_at	-	-
Affymetrix HT Rat Focus Array	1380425_at	-	-
Affymetrix HT Rat Focus Array	1377116_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1300003539.rn.1	TC1300000501.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300003538.rn.1	TC1300000501.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300003537.rn.1	TC1300000501.rn.1	RTA TC
Rat Expression Set 230	1377116_at	-	-
Rat Expression Set 230	1377116_PM_at	-	-
Rat Expression Set 230	1380425_PM_at	-	-
Rat Expression Set 230	1380425_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10764781	-	-
Rat Genome U34 Set	rc_AI012859_at	-	-
Rat Genome U34 Set	rc_AI137260_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21421685	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1357295	-	-
RatRef-12 Expression BeadChip	ILMN_70341	-	-