Rn00755834_m1 Best Coverage

• Gene Symbol: Cav1
• Gene Name: caveolin 1, caveolae protein
• Gene Aliases: Cav
• Chromosome Location: Chr.4: 44597123 - 44630206 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cav1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031556.3	NP_113744.2	2 - 3	347		64
	NM_133651.2	NP_598412.2	1 - 2	339		64
	XM_006236130.2	XP_006236192.1	2 - 3	319		64
	XM_006236131.1	XP_006236193.1	2 - 3	286		64
GenBank mRNA	AF439778.1	-	2 - 3	192		64
	AF439779.1	-	1 - 2	99		64
	BC078744.1	-	2 - 3	226		64
	BC104689.1	-	1 - 2	162		64
	BC128717.1	-	1 - 2	169		64
	BC161826.1	-	1 - 2	332	9100114	64
	CB698936.1	-	2 - 3	241		64
	CK364516.1	-	1 - 2	339		64
	FM039194.1	-	2 - 3	347		64
	Z46614.1	-	2 - 3	220		64

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400000427.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cav1

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
MAPK cascade
inactivation of MAPK activity
angiogenesis
vasculogenesis
response to hypoxia
negative regulation of endothelial cell proliferation
positive regulation of endothelial cell proliferation
negative regulation of cytokine-mediated signaling pathway
regulation of the force of heart contraction
response to ischemia
regulation of the force of heart contraction by chemical signal
triglyceride metabolic process
calcium ion transport
cellular calcium ion homeostasis
regulation of smooth muscle contraction
skeletal muscle tissue development
response to nutrient
lactation
protein localization
negative regulation of cell proliferation
cellular response to starvation
response to mechanical stimulus
positive regulation of signal transduction
negative regulation of signal transduction
response to gamma radiation
positive regulation of calcium ion transport into cytosol
posttranscriptional regulation of gene expression
positive regulation of gene expression
negative regulation of muscle cell apoptotic process
positive regulation of peptidase activity
vesicle organization
regulation of fatty acid metabolic process
lipid storage
regulation of blood coagulation
negative regulation of BMP signaling pathway
negative regulation of epithelial cell differentiation
mammary gland development
organ regeneration
positive regulation of microtubule polymerization
T cell costimulation
negative regulation of protein ubiquitination
negative regulation of protein binding
maintenance of protein location in cell
response to progesterone
negative regulation of peptidyl-serine phosphorylation
positive regulation of peptidyl-serine phosphorylation
cholesterol efflux
nitric oxide homeostasis
wound healing
vasoconstriction
response to drug
negative regulation of tyrosine phosphorylation of Stat5 protein
cholesterol homeostasis
positive regulation of catalytic activity
negative regulation of MAP kinase activity
negative regulation of MAPK cascade
response to estrogen
negative regulation of nitric oxide biosynthetic process
negative regulation of neuron differentiation
positive regulation of endocytosis
positive regulation of vasoconstriction
negative regulation of JAK-STAT cascade
microtubule polymerization
negative regulation of pinocytosis
negative regulation of smooth muscle cell proliferation
negative regulation of nitric-oxide synthase activity
protein oligomerization
protein homooligomerization
response to glucocorticoid
regulation of cytosolic calcium ion concentration
response to calcium ion
membrane depolarization
regulation of peptidase activity
calcium ion homeostasis
mammary gland involution
negative regulation of protein tyrosine kinase activity
negative regulation of ERK1 and ERK2 cascade
caveola assembly
cellular response to mechanical stimulus
cellular response to peptide hormone stimulus
cellular response to hyperoxia
cellular response to transforming growth factor beta stimulus
caveolin-mediated endocytosis
regulation of heart rate by cardiac conduction
angiotensin-activated signaling pathway involved in heart process
negative regulation of canonical Wnt signaling pathway
positive regulation of canonical Wnt signaling pathway
cellular senescence
apoptotic signaling pathway
regulation of membrane repolarization during action potential
regulation of ventricular cardiac muscle cell action potential
negative regulation of peptidyl-tyrosine autophosphorylation
negative regulation of potassium ion transmembrane transport
regulation of cell communication by electrical coupling involved in cardiac conduction
regulation of inward rectifier potassium channel activity
positive regulation of gap junction assembly
receptor internalization involved in canonical Wnt signaling pathway
negative regulation of anoikis
positive regulation of extrinsic apoptotic signaling pathway
positive regulation of intrinsic apoptotic signaling pathway
negative regulation of cation channel activity

Function(s)

SNARE binding
RNA polymerase I transcription factor binding
receptor binding
structural molecule activity
protein binding
peptidase activator activity
enzyme binding
kinase binding
protein kinase binding
syntaxin binding
protein binding, bridging
protein complex scaffold
identical protein binding
ion channel binding
protein heterodimerization activity
nitric-oxide synthase binding
inward rectifier potassium channel inhibitor activity
MDM2/MDM4 family protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P005754	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	858696	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	962542	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	723285	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	501997	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	41199	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	776875	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	99292	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	125361	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P005754	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P005754	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P005754	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P209817	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P240781	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P285741	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700146985	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	49915	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	35743	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	51935	-	-
Agilent Rat cDNA Microarray (G4105A)	700146985	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10853817	-	-
Affymetrix Rat Gene 1.0 ST Array	10853818	-	-
Affymetrix Rat Gene 1.1 ST Array	10853816	-	-
Rat Genome 230 2.0 Array	1370131_at	-	-
Rat Genome 230 2.0 Array	1372111_PM_at	-	-
Rat Genome 230 2.0 Array	1393281_PM_at	-	-
Rat Genome 230 2.0 Array	1393281_at	-	-
Rat Genome 230 2.0 Array	1370131_PM_at	-	-
Rat Genome 230 2.0 Array	1372111_at	-	-
Affymetrix HT Rat Focus Array	1370131_PM_at	-	-
Affymetrix HT Rat Focus Array	1372111_PM_at	-	-
Affymetrix HT Rat Focus Array	1393281_at	-	-
Affymetrix HT Rat Focus Array	1370131_at	-	-
Affymetrix HT Rat Focus Array	1393281_PM_at	-	-
Affymetrix HT Rat Focus Array	1372111_at	-	-
Affymetrix Rat Clariom S Assay	PSR0400003043.rn.1	TC0400000427.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400003039.rn.1	TC0400000427.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400003041.rn.1	TC0400000427.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400003044.rn.1	TC0400000427.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400003042.rn.1	TC0400000427.rn.1	RTA TC
Rat Expression Set 230	1370131_PM_at	-	-
Rat Expression Set 230	1370131_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10853816	-	-
Rat Genome U34 Set	Z46614cds_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21490390	-	-
ABI Rat Genome Survey Microarray	21907569	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376388	-	-
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376114	-	-
RatRef-12 Expression BeadChip	ILMN_58853	-	-