Rn00756371_g1 Best Coverage

• Gene Symbol: Atp5d
• Gene Name: ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
• Gene Aliases: -
• Chromosome Location: Chr.7: 12426807 - 12432120 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Atp5d
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_139106.1	NP_620806.1	3 - 4	439		58
	XM_006240845.2	XP_006240907.1	4 - 5	954		58
GenBank mRNA	BC161836.1	-	3 - 4	2099	9098303	58
	FQ214102.1	-		647		58
	FQ223899.1	-	3 - 4	487		58
	U00926.1	-	3 - 4	439		58

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700002176.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Transporter, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Atp5d

Panther Classification:

Molecular Function -

ATP synthase

Gene Ontology Categories:

Process(es)

ATP biosynthetic process
ATP synthesis coupled proton transport
ATP metabolic process

Function(s)

ATPase activity
protein complex binding
proton-transporting ATP synthase activity, rotational mechanism
proton-transporting ATPase activity, rotational mechanism

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P685906	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	807190	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	150560	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P685906	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P685906	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P685906	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P685906	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700174803	-	-
Agilent Rat cDNA Microarray (G4105A)	700174803	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10900605	-	-
Affymetrix Rat Gene 1.0 ST Array	10900603	-	-
Affymetrix Rat Gene 1.0 ST Array	10900602	-	-
Affymetrix Rat Gene 1.0 ST Array	10900604	-	-
Affymetrix Rat Gene 1.1 ST Array	10900601	-	-
Rat Genome 230 2.0 Array	1370278_PM_at	-	-
Rat Genome 230 2.0 Array	1370278_at	-	-
Affymetrix HT Rat Focus Array	1370278_PM_at	-	-
Affymetrix HT Rat Focus Array	1370278_at	-	-
Affymetrix Rat Clariom S Assay	PSR0700017283.rn.1	TC0700002176.rn.1	RTA TC
Rat Expression Set 230	1370278_PM_at	-	-
Rat Expression Set 230	1370278_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10900601	-	-
Rat Genome U34 Set	U00926_at	-	-
Rat Genome U34 Set	U00926_g_at	-	-
Rat Genome U34 Set	rc_AI104953_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22371192	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1363852	-	-
RatRef-12 Expression BeadChip	ILMN_56814	-	-