Rn00821287_g1 Best Coverage

• Gene Symbol: Rps21
• Gene Name: ribosomal protein S21
• Gene Aliases: -
• Chromosome Location: Chr.3: 175629087 - 175630205 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rps21
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031111.1	NP_112373.1	4 - 5	229		82
	XM_006235823.1	XP_006235885.1	4 - 5	318		82
GenBank mRNA	BC058464.1	-	4 - 5	234	6918340	82
	FQ210654.1	-	4 - 5	232		82
	FQ210736.1	-	4 - 5	232		82
	FQ210823.1	-	4 - 5	230		82
	FQ210868.1	-	4 - 5	231		82
	FQ212305.1	-	4 - 5	231		82
	FQ212673.1	-	4 - 5	224		82
	FQ217300.1	-	4 - 5	230		82
	FQ221031.1	-	4 - 5	232		82
	FQ221222.1	-	4 - 5	232		82
	FQ221352.1	-	4 - 5	230		82
	FQ221376.1	-	4 - 5	230		82
	FQ221719.1	-	4 - 5	231		82
	FQ221773.1	-	4 - 5	230		82
	FQ221895.1	-	4 - 5	230		82
	FQ222195.1	-	4 - 5	230		82
	FQ222197.1	-	4 - 5	230		82
	FQ222346.1	-	4 - 5	231		82
	FQ222395.1	-	4 - 5	230		82
	FQ222640.1	-	4 - 5	233		82
	FQ222661.1	-	4 - 5	230		82
	FQ222692.1	-	4 - 5	232		82
	FQ222861.1	-	4 - 5	230		82
	FQ223083.1	-	4 - 5	230		82
	FQ223085.1	-	4 - 5	230		82
	FQ223126.1	-	4 - 5	230		82
	FQ223140.1	-	4 - 5	229		82
	FQ223281.1	-	4 - 5	230		82
	FQ223324.1	-	4 - 5	230		82
	FQ223458.1	-	4 - 5	231		82
	FQ223473.1	-	4 - 5	260		82
	FQ224512.1	-	4 - 5			82
	FQ224728.1	-	4 - 5	232		82
	FQ228565.1	-	4 - 5	231		82
	FQ228580.1	-	4 - 5	231		82
	FQ228593.1	-	4 - 5	230		82
	FQ228604.1	-	4 - 5	235		82
	FQ229072.1	-	4 - 5	225		82
	FQ229301.1	-	4 - 5	234		82
	FQ229813.1	-	4 - 5	230		82
	X79059.1	-	4 - 5	229		82

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rps21

Panther Classification:

Molecular Function -

ribosomal protein

Gene Ontology Categories:

Process(es)

endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
translational elongation
biological_process
ribosomal small subunit biogenesis

Function(s)

molecular_function
structural constituent of ribosome
ribosome binding
poly(A) RNA binding
protein N-terminus binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P310152	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	511878	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P310152	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P310152	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P310152	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P310152	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700484168	-	-
Agilent Rat cDNA Microarray (G4105A)	700484168	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10842806	-	-
Affymetrix Rat Gene 1.0 ST Array	10842808	-	-
Affymetrix Rat Gene 1.0 ST Array	10842810	-	-
Affymetrix Rat Gene 1.0 ST Array	10909760	-	-
Affymetrix Rat Gene 1.0 ST Array	10842809	-	-
Affymetrix Rat Gene 1.0 ST Array	10938963	-	-
Affymetrix Rat Gene 1.0 ST Array	10873651	-	-
Affymetrix Rat Gene 1.0 ST Array	10909759	-	-
Affymetrix Rat Gene 1.0 ST Array	10842807	-	-
Affymetrix Rat Gene 1.0 ST Array	10873650	-	-
Affymetrix Rat Gene 1.1 ST Array	10842805	-	-
Affymetrix Rat Gene 1.1 ST Array	10909758	-	-
Affymetrix Rat Gene 1.1 ST Array	10873649	-	-
Affymetrix Rat Gene 1.1 ST Array	10938962	-	-
Rat Genome 230 2.0 Array	1398852_at	-	-
Rat Genome 230 2.0 Array	1398852_PM_at	-	-
Affymetrix HT Rat Focus Array	1398852_at	-	-
Affymetrix HT Rat Focus Array	1398852_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300018854.rn.1	TC0300002560.rn.1	RTA TC
Rat Expression Set 230	1398852_at	-	-
Rat Expression Set 230	1398852_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10938962	-	-
Affymetrix Rat Gene 1.0 ST Array	10909758	-	-
Affymetrix Rat Gene 1.0 ST Array	10873649	-	-
Affymetrix Rat Gene 1.0 ST Array	10842805	-	-
Rat Genome U34 Set	rc_AI178207_at	-	-
Rat Genome U34 Set	rc_AA955374_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21653893	-	-
ABI Rat Genome Survey Microarray	21983018	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1358719	-	-
RatRef-12 Expression BeadChip	ILMN_57081	-	-