Rn00821314_g1

• Gene Symbol: Ube2d3
• Gene Name: ubiquitin-conjugating enzyme E2D 3
• Gene Aliases: -
• Chromosome Location: Chr.2: 240626198 - 240655870 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ube2d3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031237.1	NP_112516.1	2 - 3	355		94
	XM_006233333.1	XP_006233395.1	3 - 4	347		94
	XM_006233334.1	XP_006233396.1	3 - 4	494		94
	XM_006233335.1	XP_006233397.1	3 - 4	301		94
	XM_006233336.2	XP_006233398.1	3 - 4	347		94
	XM_006233337.1	XP_006233399.1	3 - 4	494		94
	XM_006233338.1	XP_006233400.1	3 - 4	332		94
GenBank mRNA	AB006852.1	-	2 - 3	355		94
	AY724500.1	-	3 - 4	302		94
	BC072696.1	-	3 - 4	278	7105617	94
	FQ233355.1	-	3 - 4	322		94
	U13175.1	-	2 - 3	209		94

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200002258.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ube2d3

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

protein polyubiquitination
DNA repair
ubiquitin-dependent protein catabolic process
protein monoubiquitination
apoptotic process
protein ubiquitination
proteasome-mediated ubiquitin-dependent protein catabolic process
protein K48-linked ubiquitination
protein K11-linked ubiquitination

Function(s)

ubiquitin-protein transferase activity
ATP binding
ligase activity
ubiquitin conjugating enzyme activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P165751	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	883184	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	525572	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	767181	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	839716	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	482415	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	726371	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	484834	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	511247	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	219451	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	473318	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	349371	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	734724	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	762571	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	458558	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	778041	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	480315	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	889173	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	420726	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	787282	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	961886	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	530191	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	108517	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	5970	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	106728	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P165751	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P165751	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P165751	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P242252	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P12545	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	1683	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	93267	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10819234	-	-
Affymetrix Rat Gene 1.0 ST Array	10819240	-	-
Affymetrix Rat Gene 1.0 ST Array	10819235	-	-
Affymetrix Rat Gene 1.0 ST Array	10819242	-	-
Affymetrix Rat Gene 1.0 ST Array	10819236	-	-
Affymetrix Rat Gene 1.0 ST Array	10819243	-	-
Affymetrix Rat Gene 1.0 ST Array	10819239	-	-
Affymetrix Rat Gene 1.0 ST Array	10819238	-	-
Affymetrix Rat Gene 1.0 ST Array	10819237	-	-
Affymetrix Rat Gene 1.1 ST Array	10819232	-	-
Rat Genome 230 2.0 Array	1399160_a_at	-	-
Rat Genome 230 2.0 Array	1367456_at	-	-
Rat Genome 230 2.0 Array	1398802_at	-	-
Rat Genome 230 2.0 Array	1399160_PM_a_at	-	-
Rat Genome 230 2.0 Array	1398802_PM_at	-	-
Rat Genome 230 2.0 Array	1367456_PM_at	-	-
Affymetrix HT Rat Focus Array	1367456_at	-	-
Affymetrix HT Rat Focus Array	1398802_PM_at	-	-
Affymetrix HT Rat Focus Array	1367456_PM_at	-	-
Affymetrix HT Rat Focus Array	1399160_PM_a_at	-	-
Affymetrix HT Rat Focus Array	1398802_at	-	-
Affymetrix HT Rat Focus Array	1399160_a_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200015649.rn.1	TC0200002258.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200015652.rn.1	TC0200002258.rn.1	RTA TC
Rat Expression Set 230	1367456_at	-	-
Rat Expression Set 230	1398802_PM_at	-	-
Rat Expression Set 230	1399160_PM_a_at	-	-
Rat Expression Set 230	1399160_a_at	-	-
Rat Expression Set 230	1367456_PM_at	-	-
Rat Expression Set 230	1398802_at	-	-
Rat Expression Set 230	1367456_at	-	-
Rat Expression Set 230	1367456_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10819232	-	-
Rat Genome U34 Set	U13177_at	-	-
Rat Genome U34 Set	rc_AA900187_at	-	-
Rat Genome U34 Set	rc_AI233229_at	-	-
Rat Genome U34 Set	rc_AI234889_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22152952	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1360101	-	-
RatRef-12 Expression BeadChip	ILMN_49242	-	-