Rn00821347_g1

• Gene Symbol: Phgdh
• Gene Name: phosphoglycerate dehydrogenase
• Gene Aliases: -
• Chromosome Location: Chr.2: 200484245 - 200513564 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Phgdh
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031620.1	NP_113808.1	12 - 13	1555		96
	XM_006233010.1	XP_006233072.1	11 - 12	1578		96
GenBank mRNA	BC086327.1	-	11 - 12	1583	7115765	96
	X97772.1	-	11 - 12	1514		96

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Phgdh

Panther Classification:

Molecular Function -

dehydrogenase

Gene Ontology Categories:

Process(es)

glutamine metabolic process
glycine metabolic process
L-serine metabolic process
L-serine biosynthetic process
threonine metabolic process
serine family amino acid biosynthetic process
gamma-aminobutyric acid metabolic process
regulation of gene expression
taurine metabolic process
spinal cord development
glial cell development
neural tube development
neurogenesis
neuron projection development
oxidation-reduction process
G1 to G0 transition

Function(s)

phosphoglycerate dehydrogenase activity
NAD binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P123078	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	512248	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	268212	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	107234	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	17377	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	753565	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	706612	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	323457	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	898245	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	565371	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	877537	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	866430	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	191599	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	414495	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	939447	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	490327	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	471701	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	39739	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	46036	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	153280	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	44578	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P123078	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P123078	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P123078	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P710738	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	701746038	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	103656	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	14522	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	52347	-	-
Agilent Rat cDNA Microarray (G4105A)	701746038	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10825340	-	-
Affymetrix Rat Gene 1.0 ST Array	10825333	-	-
Affymetrix Rat Gene 1.0 ST Array	10825335	-	-
Affymetrix Rat Gene 1.0 ST Array	10825338	-	-
Affymetrix Rat Gene 1.0 ST Array	10825331	-	-
Affymetrix Rat Gene 1.0 ST Array	10825336	-	-
Affymetrix Rat Gene 1.0 ST Array	10825330	-	-
Affymetrix Rat Gene 1.0 ST Array	10825337	-	-
Affymetrix Rat Gene 1.0 ST Array	10825329	-	-
Affymetrix Rat Gene 1.0 ST Array	10825332	-	-
Affymetrix Rat Gene 1.0 ST Array	10825334	-	-
Affymetrix Rat Gene 1.0 ST Array	10825341	-	-
Affymetrix Rat Gene 1.0 ST Array	10825339	-	-
Affymetrix Rat Gene 1.0 ST Array	10825342	-	-
Affymetrix Rat Gene 1.1 ST Array	10825328	-	-
Rat Genome 230 2.0 Array	1367811_at	-	-
Rat Genome 230 2.0 Array	1367811_PM_at	-	-
Affymetrix HT Rat Focus Array	1367811_PM_at	-	-
Affymetrix HT Rat Focus Array	1367811_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200029479.rn.1	TC0200004288.rn.1	RTA TC
Rat Expression Set 230	1367811_PM_at	-	-
Rat Expression Set 230	1367811_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10825328	-	-
Rat Genome U34 Set	X97772_at	-	-
Rat Genome U34 Set	rc_AI008677_s_at	-	-
Rat Genome U34 Set	X97772_g_at	-	-
Rat Genome U34 Set	rc_AA899141_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22169111	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1357966	-	-
RatRef-12 Expression BeadChip	ILMN_63866	-	-