Rn00821407_g1 Best Coverage

• Gene Symbol: Calm1
• Gene Name: calmodulin 1
• Gene Aliases: CaMI
• Chromosome Location: Chr.6: 124217241 - 124225292 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Calm1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031969.2	NP_114175.1	5 - 6	534		82
GenBank mRNA	AF178845.1	-		469		82
	FQ211760.1	-	5 - 6	601		82
	FQ212721.1	-		939		82
	FQ213013.1	-	1 - 2	96		82
	FQ213227.1	-	5 - 6	647		82
	FQ225380.1	-	5 - 6	560		82
	FQ226971.1	-	5 - 6	606		82
	FQ227186.1	-	5 - 6	606		82
	FQ232999.1	-	2 - 3	165		82
	X13933.1	-	5 - 6	534		82

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, Rat Phosphodiesterase, Inventoried, Rat Phosphodiesterase, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Calm1

Panther Classification:

Molecular Function -

calmodulin-related

Gene Ontology Categories:

Process(es)

G2/M transition of mitotic cell cycle
response to amphetamine
regulation of heart rate
detection of calcium ion
activation of adenylate cyclase activity
regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
calcium-mediated signaling
substantia nigra development
positive regulation of cyclic nucleotide metabolic process
regulation of cytokinesis
positive regulation of phosphoprotein phosphatase activity
positive regulation of protein dephosphorylation
positive regulation of DNA binding
positive regulation of nitric-oxide synthase activity
positive regulation of cyclic-nucleotide phosphodiesterase activity
response to calcium ion
regulation of cardiac muscle contraction
regulation of ryanodine-sensitive calcium-release channel activity
positive regulation of ryanodine-sensitive calcium-release channel activity
regulation of store-operated calcium channel activity
regulation of high voltage-gated calcium channel activity

Function(s)

calcium channel regulator activity
calcium ion binding
protein binding
adenylate cyclase binding
protein kinase binding
protein domain specific binding
enzyme regulator activity
nitric-oxide synthase regulator activity
titin binding
type 3 metabotropic glutamate receptor binding
thioesterase binding
N-terminal myristoylation domain binding
phospholipase binding
phosphatidylinositol 3-kinase binding
ion channel binding
protein N-terminus binding
calcium-dependent protein binding
nitric-oxide synthase binding
protein phosphatase activator activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P191784	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P015022	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	355652	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	612646	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	520161	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	646859	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	893985	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	310473	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	352727	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	797195	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	927345	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	42037	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P191784	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P015022	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P191784	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P015022	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P191784	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P015022	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P191784	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P374988	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700146904	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700148336	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	103265	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	78317	-	-
Agilent Rat cDNA Microarray (G4105A)	700148336	-	-
Agilent Rat cDNA Microarray (G4105A)	700146904	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10702198	-	-
Affymetrix Rat Gene 1.0 ST Array	10702197	-	-
Affymetrix Rat Gene 1.0 ST Array	10886382	-	-
Affymetrix Rat Gene 1.0 ST Array	10886379	-	-
Affymetrix Rat Gene 1.0 ST Array	10886381	-	-
Affymetrix Rat Gene 1.0 ST Array	10886383	-	-
Affymetrix Rat Gene 1.0 ST Array	10886380	-	-
Affymetrix Rat Gene 1.1 ST Array	10702196	-	-
Affymetrix Rat Gene 1.1 ST Array	10886378	-	-
Rat Genome 230 2.0 Array	1369936_PM_at	-	-
Rat Genome 230 2.0 Array	1369936_at	-	-
Rat Genome 230 2.0 Array	1387772_at	-	-
Rat Genome 230 2.0 Array	1369937_PM_at	-	-
Rat Genome 230 2.0 Array	1387772_PM_at	-	-
Rat Genome 230 2.0 Array	1369937_at	-	-
Affymetrix HT Rat Focus Array	1387772_at	-	-
Affymetrix HT Rat Focus Array	1369936_at	-	-
Affymetrix HT Rat Focus Array	1369937_PM_at	-	-
Affymetrix HT Rat Focus Array	1369937_at	-	-
Affymetrix HT Rat Focus Array	1387772_PM_at	-	-
Affymetrix HT Rat Focus Array	1369936_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0600009333.rn.1	TC0600001346.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600009334.rn.1	TC0600001346.rn.1	RTA TC
Rat Expression Set 230	1369936_at	-	-
Rat Expression Set 230	1369937_PM_at	-	-
Rat Expression Set 230	1369937_at	-	-
Rat Expression Set 230	1387772_PM_at	-	-
Rat Expression Set 230	1387772_at	-	-
Rat Expression Set 230	1369936_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10886378	-	-
Affymetrix Rat Gene 1.0 ST Array	10702196	-	-
Rat Genome U34 Set	X13933_s_at	-	-
Rat Genome U34 Set	E02315cds_f_at	-	-
Rat Genome U34 Set	rc_AA849525_s_at	-	-
Rat Genome U34 Set	rc_AA849525_i_at	-	-
Rat Genome U34 Set	rc_AI171814_at	-	-
Rat Genome U34 Set	rc_AI180372_f_at	-	-
Rat Genome U34 Set	rc_AI102076_at	-	-
Rat Genome U34 Set	rc_AI229037_at	-	-
Rat Genome U34 Set	E02315cds_f_at	-	-
Rat Genome U34 Set	X13933_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376284	-	-