Rn01096861_m1

Gene Symbol:

LOC100366044 Fxr1

Gene Name:

rCG41429-like

fragile X mental retardation, autosomal homolog 1

Gene Aliases:

-

Fxr1h

Chromosome Location:

Chr.2: 120510608 - 120521804 on Build Rnor_6.0

Chromosome Location:

Chr.2: 120529716 - 120570356 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: LOC100366044
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_008760951.1	XP_008759173.1	1	1411		94
	XM_008760952.1	XP_008759174.1	1	1411		94

Gene Symbol: Fxr1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
GenBank mRNA	BC083807.1	-		1501		94

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200003481.rn.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, 1700, Inventoried, Both primers and probe map within a single exon

Gene Ontology Categories:

Process(es)

negative regulation of translation

Function(s)

mRNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P130977	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	525110	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	597946	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	822864	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	486796	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	348023	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	300970	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	897280	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	195544	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	750364	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	335612	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	492245	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	458669	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	464955	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	394116	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	794801	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	279885	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	487463	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	797350	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	237363	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	192634	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	78130	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	667265	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	363050	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	858933	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	972886	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	896639	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	390691	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	807260	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	247801	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	910064	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	662772	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	136828	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	25054	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	172957	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	127298	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P130977	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P130977	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P130977	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P10309	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	26534	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	9089	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	86329	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	15113	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10814841	-	-
Affymetrix Rat Gene 1.0 ST Array	10814845	-	-
Affymetrix Rat Gene 1.0 ST Array	10814846	-	-
Affymetrix Rat Gene 1.0 ST Array	10814843	-	-
Affymetrix Rat Gene 1.0 ST Array	10814836	-	-
Affymetrix Rat Gene 1.0 ST Array	10814838	-	-
Affymetrix Rat Gene 1.0 ST Array	10814835	-	-
Affymetrix Rat Gene 1.0 ST Array	10814839	-	-
Affymetrix Rat Gene 1.0 ST Array	10822782	-	-
Affymetrix Rat Gene 1.0 ST Array	10814840	-	-
Affymetrix Rat Gene 1.0 ST Array	10822783	-	-
Affymetrix Rat Gene 1.0 ST Array	10814842	-	-
Affymetrix Rat Gene 1.0 ST Array	10814834	-	-
Affymetrix Rat Gene 1.0 ST Array	10814844	-	-
Affymetrix Rat Gene 1.0 ST Array	10814837	-	-
Affymetrix Rat Gene 1.1 ST Array	10814833	-	-
Affymetrix Rat Gene 1.1 ST Array	10822781	-	-
Rat Genome 230 2.0 Array	1378054_at	-	-
Rat Genome 230 2.0 Array	1383236_at	-	-
Rat Genome 230 2.0 Array	1378054_PM_at	-	-
Rat Genome 230 2.0 Array	1383236_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200023674.rn.1	TC0200003481.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200023672.rn.1	TC0200003481.rn.1	RTA TC
Rat Expression Set 230	1383236_at	-	-
Rat Expression Set 230	1383236_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10822781	-	-
Affymetrix Rat Gene 1.0 ST Array	10814833	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21989492	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376462	-	-
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376023	-	-