Rn01212680_g1

• Gene Symbol: Shc1
• Gene Name: SHC (Src homology 2 domain containing) transforming protein 1
• Gene Aliases: P66shc
• Chromosome Location: Chr.2: 188745503 - 188757066 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Shc1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001164060.1	NP_001157532.1	11 - 12	1815		72
	NM_053517.2	NP_445969.2	12 - 13	1382		72
GenBank mRNA	BC088298.1	-	12 - 13	1382		72

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200004978.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Shc1

Gene Ontology Categories:

Process(es)

MAPK cascade
angiogenesis
response to hypoxia
epidermal growth factor receptor signaling pathway
heart development
aging
insulin receptor signaling pathway
response to toxic substance
response to organic cyclic compound
actin cytoskeleton organization
neuron differentiation
animal organ regeneration
neuron projection development
actin cytoskeleton reorganization
response to insulin
cellular response to insulin stimulus
response to nicotine
intracellular signal transduction
regulation of growth
regulation of cell population proliferation
response to hydrogen peroxide
positive regulation of DNA replication
positive regulation of vasoconstriction
positive regulation of smooth muscle cell proliferation
response to glucocorticoid
cell-cell adhesion

Function(s)

phosphotyrosine residue binding
epidermal growth factor receptor binding
insulin receptor binding
insulin-like growth factor receptor binding
neurotrophin TRKA receptor binding
protein binding
protein kinase binding
receptor tyrosine kinase binding
protein-containing complex binding
ephrin receptor binding
phosphoprotein binding
protein phosphatase 2A binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P019295	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P106779	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	956862	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	107272	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	88970	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	460709	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	125249	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	302080	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	161340	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	216533	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P106779	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P019295	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P019295	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P106779	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P106779	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P019295	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P445306	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P342020	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10816792	-	-
Affymetrix Rat Gene 1.0 ST Array	10816795	-	-
Affymetrix Rat Gene 1.0 ST Array	10816799	-	-
Affymetrix Rat Gene 1.0 ST Array	10816800	-	-
Affymetrix Rat Gene 1.0 ST Array	10816796	-	-
Affymetrix Rat Gene 1.0 ST Array	10816794	-	-
Affymetrix Rat Gene 1.0 ST Array	10816798	-	-
Affymetrix Rat Gene 1.0 ST Array	10816797	-	-
Affymetrix Rat Gene 1.1 ST Array	10816791	-	-
Rat Genome 230 2.0 Array	1377594_PM_at	-	-
Rat Genome 230 2.0 Array	1377594_at	-	-
Affymetrix HT Rat Focus Array	1377594_at	-	-
Affymetrix HT Rat Focus Array	1377594_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200034717.rn.1	TC0200004978.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200034718.rn.1	TC0200004978.rn.1	RTA TC
Rat Expression Set 230	1377594_at	-	-
Rat Expression Set 230	1377594_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10816791	-	-
Rat Genome U34 Set	rc_AA899410_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20910974	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1356122	-	-