Rn01399463_m1 Best Coverage

• Gene Symbol: Cnp
• Gene Name: 2',3'-cyclic nucleotide 3' phosphodiesterase
• Gene Aliases: CNPF, CNPI, CNPII, Cnp1
• Chromosome Location: Chr.10: 88489993 - 88497357 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cnp
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012809.2	NP_036941.1	3 - 4	898		100
	XM_006247260.2	XP_006247322.1	3 - 4	918		100
	XM_006247261.2	XP_006247323.1	3 - 4	922		100
	XM_008767948.1	XP_008766170.1	3 - 4	832		100
GenBank mRNA	BC098066.1	-	3 - 4	898	7458826	100
	L16532.1	-	3 - 4	897		100
	M18630.1	-	2 - 3	1191		100

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000001633.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Rat Phosphodiesterase, 1700, Inventoried, Rat Phosphodiesterase, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cnp

Panther Classification:

Molecular Function -

hydrolase, phosphodiesterase, metabolite interconversion enzyme

Gene Ontology Categories:

Process(es)

microtubule cytoskeleton organization
axonogenesis
aging
adult locomotory behavior
cyclic nucleotide catabolic process
response to toxic substance
substantia nigra development
forebrain development
response to lipopolysaccharide
regulation of mitochondrial membrane permeability
oligodendrocyte differentiation

Function(s)

RNA binding
2',3'-cyclic-nucleotide 3'-phosphodiesterase activity
cyclic nucleotide binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P100207	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	534963	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	62219	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	379635	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	935182	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	401296	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	98372	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P100207	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P100207	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P100207	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P100207	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700518735	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	702556875	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	14848	-	-
Agilent Rat cDNA Microarray (G4105A)	700518735	-	-
Agilent Rat cDNA Microarray (G4105A)	702556875	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10738213	-	-
Affymetrix Rat Gene 1.0 ST Array	10738214	-	-
Affymetrix Rat Gene 1.0 ST Array	10738211	-	-
Affymetrix Rat Gene 1.0 ST Array	10738212	-	-
Affymetrix Rat Gene 1.0 ST Array	10738210	-	-
Affymetrix Rat Gene 1.0 ST Array	10738215	-	-
Affymetrix Rat Gene 1.1 ST Array	10738209	-	-
Rat Genome 230 2.0 Array	1387897_at	-	-
Rat Genome 230 2.0 Array	1387897_PM_at	-	-
Rat Genome 230 2.0 Array	1370693_PM_a_at	-	-
Rat Genome 230 2.0 Array	1370693_a_at	-	-
Affymetrix HT Rat Focus Array	1370693_a_at	-	-
Affymetrix HT Rat Focus Array	1387897_PM_at	-	-
Affymetrix HT Rat Focus Array	1387897_at	-	-
Affymetrix HT Rat Focus Array	1370693_PM_a_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000014470.rn.1	TC1000001633.rn.1	RTA TC
Rat Expression Set 230	1387897_PM_at	-	-
Rat Expression Set 230	1387897_at	-	-
Rat Expression Set 230	1370693_PM_a_at	-	-
Rat Expression Set 230	1370693_a_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10738209	-	-
Rat Genome U34 Set	L16532_at	-	-
Rat Genome U34 Set	L16532_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21579318	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1364419	-	-
RatRef-12 Expression BeadChip	ILMN_64861	-	-