Rn01399539_g1

• Gene Symbol: LOC690911
• Gene Name: similar to Msx2-interacting protein (SPEN homolog) (SMART/HDAC1-associated repressor protein)
• Gene Aliases: RGD1564662
• Chromosome Location: Chr.5: 160015573 - 160070915 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LOC690911
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001271495.1	NP_001258424.1	6 - 7	1523		64

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500003960.rn.1

• Set Membership: Amplicon length less than or equal to 70, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of neurogenesis

Function(s)

nucleotide binding
RNA polymerase II transcription factor binding
transcriptional repressor activity, RNA polymerase II transcription factor binding
nucleic acid binding
DNA binding
single-stranded DNA binding
transcription factor activity, sequence-specific DNA binding
transcription corepressor activity
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0500029956.rn.1	TC0500003960.rn.1	RTA TC