Rn01401088_g1

• Gene Symbol: Cyp27a1
• Gene Name: cytochrome P450, family 27, subfamily a, polypeptide 1
• Gene Aliases: Cyp27, P450C27
• Chromosome Location: Chr.9: 81968289 - 81998213 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cyp27a1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_006245175.1	XP_006245237.1	8 - 9	1364		74
GenBank mRNA	BC061848.1	-	8 - 9	1528	5621918	74
	M38566.1	-	8 - 9	1529		74

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0900000908.rn.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, 1700, Probe spans exons

Panther Classification:

Molecular Function -

oxygenase

Gene Ontology Categories:

Process(es)

steroid catabolic process
cholesterol metabolic process
calcitriol biosynthetic process from calciol
oxidation-reduction process

Function(s)

iron ion binding
heme binding
vitamin D3 25-hydroxylase activity
cholesterol 26-hydroxylase activity
cholestanetriol 26-monooxygenase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P15847	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	247237	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	87265	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	935874	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	44948	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	925268	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	289544	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	157759	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	566296	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	312602	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	420497	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	585771	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	782440	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	896970	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	818915	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	895976	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	430200	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	604541	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	695945	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	918563	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	272517	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	152991	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	101615	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	99882	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	3984	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P15847	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P15847	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P15847	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P15847	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	20014	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	19800	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10924416	-	-
Affymetrix Rat Gene 1.0 ST Array	10924414	-	-
Affymetrix Rat Gene 1.0 ST Array	10924421	-	-
Affymetrix Rat Gene 1.0 ST Array	10924419	-	-
Affymetrix Rat Gene 1.0 ST Array	10924417	-	-
Affymetrix Rat Gene 1.0 ST Array	10924418	-	-
Affymetrix Rat Gene 1.0 ST Array	10924415	-	-
Affymetrix Rat Gene 1.0 ST Array	10924420	-	-
Affymetrix Rat Gene 1.0 ST Array	10924413	-	-
Affymetrix Rat Gene 1.1 ST Array	10924411	-	-
Rat Genome 230 2.0 Array	1387914_at	-	-
Rat Genome 230 2.0 Array	1387914_PM_at	-	-
Affymetrix HT Rat Focus Array	1387914_PM_at	-	-
Affymetrix HT Rat Focus Array	1387914_at	-	-
Affymetrix Rat Clariom S Assay	PSR0900007607.rn.1	TC0900000908.rn.1	RTA TC
Rat Expression Set 230	1387914_at	-	-
Rat Expression Set 230	1387914_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10924411	-	-
Rat Genome U34 Set	M38566mRNA_s_at	-	-
Rat Genome U34 Set	Y07534cds_s_at	-	-
Rat Genome U34 Set	Y07534cds_s_at	-	-
Rat Genome U34 Set	M38566mRNA_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22167804	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376833	-	-