Rn01401244_m1 Best Coverage

• Gene Symbol: Ikzf1
• Gene Name: IKAROS family zinc finger 1
• Gene Aliases: RGD1562979
• Chromosome Location: Chr.14: 91782270 - 91867828 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ikzf1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001107237.1	NP_001100707.1	2 - 3	249		71
	XM_006251491.2	XP_006251553.1	2 - 3	764		71
	XM_006251492.2	XP_006251554.1	2 - 3	4599		71
	XM_006251493.2	XP_006251555.1	2 - 3	302		71
	XM_006251494.2	XP_006251556.2	2 - 3	589		71
	XM_006251495.2	XP_006251557.1	2 - 3	277		71
	XM_006251496.2	XP_006251558.1	2 - 3	76		71
	XM_006251497.2	XP_006251559.1	2 - 3	310		71
	XM_008770312.1	XP_008768534.1	2 - 3	589		71
	XM_008770313.1	XP_008768535.1	2 - 3	589		71
	XM_008770314.1	XP_008768536.1	2 - 3	589		71
	XM_008770315.1	XP_008768537.1	2 - 3	589		71
	XM_008770316.1	XP_008768538.1	2 - 3	589		71
	XM_008770317.1	XP_008768539.1	2 - 3	589		71
	XM_008770318.1	XP_008768540.1	2 - 3	589		71
	XM_008770319.1	XP_008768541.1	2 - 3	589		71

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1400001003.rn.1

• Set Membership: Amplicon length between 71 and 85, Recommended Assay, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
natural killer cell differentiation
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
hemopoiesis
B cell differentiation
T cell differentiation
forebrain development
positive regulation of multicellular organism growth
positive regulation of B cell differentiation
positive regulation of neutrophil differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
lymph node development
thymus development
Peyer's patch development
gland development
positive regulation of NK T cell differentiation
retina development in camera-type eye

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
transcription factor activity, sequence-specific DNA binding
sequence-specific DNA binding
transcription regulatory region DNA binding
metal ion binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1400007413.rn.1	TC1400001003.rn.1	RTA TC