Rn01401528_m1 Best Coverage

• Gene Symbol: Rpe
• Gene Name: ribulose-5-phosphate-3-epimerase
• Gene Aliases: -
• Chromosome Location: Chr.9: 73687682 - 73713643 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rpe
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001033903.1	NP_001029075.1	1 - 2	131		64
	XM_006245104.2	XP_006245166.1	1 - 2	227		64
	XM_006245105.2	XP_006245167.1	1 - 2	230		64
	XM_006245106.2	XP_006245168.1	1 - 2	226		64
	XM_006245107.2	XP_006245169.1	1 - 2	227		64
	XM_006245109.2	XP_006245171.1	1 - 2	223		64
	XM_008767287.1	XP_008765509.1	1 - 2	231		64
	XM_008767288.1	XP_008765510.1	1 - 2	235		64
GenBank mRNA	BC101869.1	-	1 - 2	131	5621971	64

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0900000821.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rpe

Gene Ontology Categories:

Process(es)

carbohydrate metabolic process
pentose-phosphate shunt
pentose-phosphate shunt, non-oxidative branch
pentose catabolic process
cellular carbohydrate metabolic process

Function(s)

ribulose-phosphate 3-epimerase activity
carbohydrate binding
identical protein binding
protein homodimerization activity
metal ion binding
monosaccharide binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P652890	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P248663	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	229469	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	926863	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	496258	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	820144	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	5865	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	408262	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	472686	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	50277	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	55154	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	691469	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	656428	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	299536	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	119294	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	177696	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P652890	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P248663	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P652890	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P248663	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P652890	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P248663	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P248663	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P652890	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	42747	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	4625	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10924077	-	-
Affymetrix Rat Gene 1.0 ST Array	10924079	-	-
Affymetrix Rat Gene 1.0 ST Array	10924080	-	-
Affymetrix Rat Gene 1.0 ST Array	10924078	-	-
Affymetrix Rat Gene 1.0 ST Array	10924083	-	-
Affymetrix Rat Gene 1.0 ST Array	10924082	-	-
Affymetrix Rat Gene 1.1 ST Array	10924076	-	-
Rat Genome 230 2.0 Array	1389202_at	-	-
Rat Genome 230 2.0 Array	1389202_PM_at	-	-
Affymetrix HT Rat Focus Array	1389202_at	-	-
Affymetrix HT Rat Focus Array	1389202_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0900006815.rn.1	TC0900000821.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0900006813.rn.1	TC0900000821.rn.1	RTA TC
Rat Expression Set 230	1389202_at	-	-
Rat Expression Set 230	1389202_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10924076	-	-
Rat Genome U34 Set	rc_AA944520_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22319811	-	-