Rn01403240_m1 Best Coverage

• Gene Symbol: Elavl1
• Gene Name: ELAV like RNA binding protein 1
• Gene Aliases: HuR
• Chromosome Location: Chr.12: 2461502 - 2502432 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Elavl1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108848.1	NP_001102318.1	5 - 6	808		68
GenBank mRNA	AB212679.1	-	4 - 5	656		68
	BC168972.1	-	5 - 6	814	9034405	68

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200000045.rn.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

translation initiation factor

Gene Ontology Categories:

Process(es)

positive regulation of translation
mRNA stabilization
3'-UTR-mediated mRNA stabilization
regulation of stem cell population maintenance

Function(s)

nucleotide binding
RNA binding
double-stranded RNA binding
mRNA 3'-UTR binding
AU-rich element binding
protein kinase binding
mRNA 3'-UTR AU-rich region binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P095966	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	108096	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	422168	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	407207	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	447072	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	753201	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	440549	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	580128	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	144943	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	862459	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	12457	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	755244	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	357460	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	898602	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	36941	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	703132	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	694516	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	465266	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	522609	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	455824	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	581111	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	401941	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	190023	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	158929	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	782577	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	207862	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	116874	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	570402	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	207068	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	33423	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	297434	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	410646	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	622596	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	16942	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	140052	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	107266	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	171693	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	32382	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P095966	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P095966	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P095966	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P475587	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	37850	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	26824	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	17457	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10756082	-	-
Affymetrix Rat Gene 1.0 ST Array	10756083	-	-
Affymetrix Rat Gene 1.0 ST Array	10756085	-	-
Affymetrix Rat Gene 1.0 ST Array	10756080	-	-
Affymetrix Rat Gene 1.0 ST Array	10756081	-	-
Affymetrix Rat Gene 1.0 ST Array	10756084	-	-
Affymetrix Rat Gene 1.1 ST Array	10756079	-	-
Rat Genome 230 2.0 Array	1391743_PM_at	-	-
Rat Genome 230 2.0 Array	1375892_PM_at	-	-
Rat Genome 230 2.0 Array	1376430_PM_at	-	-
Rat Genome 230 2.0 Array	1382952_at	-	-
Rat Genome 230 2.0 Array	1376430_at	-	-
Rat Genome 230 2.0 Array	1393188_at	-	-
Rat Genome 230 2.0 Array	1391743_at	-	-
Rat Genome 230 2.0 Array	1382952_PM_at	-	-
Rat Genome 230 2.0 Array	1393188_PM_at	-	-
Rat Genome 230 2.0 Array	1375892_at	-	-
Affymetrix HT Rat Focus Array	1393188_PM_at	-	-
Affymetrix HT Rat Focus Array	1393188_at	-	-
Affymetrix HT Rat Focus Array	1375892_at	-	-
Affymetrix HT Rat Focus Array	1375892_PM_at	-	-
Affymetrix HT Rat Focus Array	1391743_PM_at	-	-
Affymetrix HT Rat Focus Array	1391743_at	-	-
Affymetrix Rat Clariom S Assay	PSR1200000471.rn.1	TC1200000045.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200000473.rn.1	TC1200000045.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200000475.rn.1	TC1200000045.rn.1	RTA TC
Rat Expression Set 230	1375892_PM_at	-	-
Rat Expression Set 230	1375892_at	-	-
Rat Expression Set 230	1393188_at	-	-
Rat Expression Set 230	1391743_PM_at	-	-
Rat Expression Set 230	1393188_PM_at	-	-
Rat Expression Set 230	1391743_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10756079	-	-
Rat Genome U34 Set	rc_AA925921_at	-	-
Rat Genome U34 Set	rc_AA944605_at	-	-
Rat Genome U34 Set	rc_AI235032_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22228346	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1370365	-	-