Rn01404927_g1 Best Coverage

• Gene Symbol: Comt
• Gene Name: catechol-O-methyltransferase
• Gene Aliases: -
• Chromosome Location: Chr.11: 86715981 - 86735630 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Comt
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012531.2	NP_036663.1	2 - 3	430		62
	XM_006248603.2	XP_006248665.1	2 - 3	431		62
GenBank mRNA	BC081850.1	-	2 - 3	288	7191956	62
	CK478774.1	-	2 - 3	550		62
	FQ209401.1	-	1 - 2	143		62
	FQ209488.1	-	1 - 2	149		62
	FQ209638.1	-	1 - 2	143		62
	FQ209670.1	-	1 - 2	143		62
	FQ209706.1	-	1 - 2	154		62
	FQ210267.1	-	1 - 2	143		62
	FQ210430.1	-	1 - 2	146		62
	FQ218190.1	-	1 - 2	145		62
	FQ218375.1	-	1 - 2	153		62
	FQ218564.1	-	1 - 2	145		62
	FQ218595.1	-	1 - 2	145		62
	FQ219155.1	-	1 - 2	150		62
	FQ219257.1	-	1 - 2	150		62
	FQ219433.1	-	1 - 2	145		62
	FQ223536.1	-	1 - 2	145		62
	FQ228829.1	-	1 - 2	143		62
	FQ228870.1	-	1 - 2	151		62
	FQ229523.1	-	1 - 2	125		62
	M60753.1	-		234		62

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1100000987.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Comt

Panther Classification:

Molecular Function -

methyltransferase

Gene Ontology Categories:

Process(es)

female pregnancy
learning
short-term memory
estrogen metabolic process
catechol-containing compound metabolic process
response to organic cyclic compound
cellular response to phosphate starvation
methylation
response to lipopolysaccharide
developmental process
negative regulation of renal sodium excretion
neurotransmitter catabolic process
dopamine metabolic process
dopamine catabolic process
response to drug
negative regulation of dopamine metabolic process
S-adenosylhomocysteine metabolic process
S-adenosylmethionine metabolic process
response to pain
multicellular organismal reproductive process
negative regulation of smooth muscle cell proliferation
positive regulation of homocysteine metabolic process
regulation of sensory perception of pain

Function(s)

magnesium ion binding
catechol O-methyltransferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1100005622.rn.1	TC1100000987.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100005627.rn.1	TC1100000987.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100005623.rn.1	TC1100000987.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100005628.rn.1	TC1100000987.rn.1	RTA TC