Rn01405759_m1 Best Coverage

• Gene Symbol: Ndfip1
• Gene Name: Nedd4 family interacting protein 1
• Gene Aliases: -
• Chromosome Location: Chr.18: 31574753 - 31625286 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ndfip1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001013059.1	NP_001013077.1	6 - 7	699		82
	XM_006254633.2	XP_006254695.1	6 - 7	767		82
GenBank mRNA	BC085887.1	-	6 - 7	699	7192378	82

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1800000374.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ndfip1

Gene Ontology Categories:

Process(es)

regulation of myeloid leukocyte differentiation
negative regulation of type 2 immune response
cellular iron ion homeostasis
signal transduction
negative regulation of gene expression
positive regulation of protein ubiquitination
negative regulation of transporter activity
negative regulation of interleukin-4 production
negative regulation of T cell proliferation
positive regulation of I-kappaB kinase/NF-kappaB signaling
ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
regulation of lymphocyte differentiation
positive regulation of protein catabolic process
negative regulation of isotype switching to IgE isotypes
regulation of isotype switching to IgG isotypes
negative regulation of inflammatory response
negative regulation of protein transport

Function(s)

signal transducer activity
protein binding
WW domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P166216	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	341530	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	257647	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	259303	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	565954	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	855424	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	700963	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	326066	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	902974	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	386976	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	907892	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	549807	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	530863	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	737820	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	877769	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	73306	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	727795	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	262265	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	240446	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	473755	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	572836	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	887389	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	419744	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	624497	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	146275	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	361377	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	323917	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	696992	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	677594	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	837043	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	533031	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	251110	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	143884	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	546303	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	93035	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	35574	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	51157	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	54905	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	68804	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P166216	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P166216	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P166216	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P166216	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	88128	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	59573	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	37289	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	12237	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10801294	-	-
Affymetrix Rat Gene 1.0 ST Array	10801291	-	-
Affymetrix Rat Gene 1.0 ST Array	10801296	-	-
Affymetrix Rat Gene 1.0 ST Array	10801295	-	-
Affymetrix Rat Gene 1.0 ST Array	10801297	-	-
Affymetrix Rat Gene 1.0 ST Array	10801292	-	-
Affymetrix Rat Gene 1.0 ST Array	10801293	-	-
Affymetrix Rat Gene 1.1 ST Array	10801290	-	-
Rat Genome 230 2.0 Array	1398893_at	-	-
Rat Genome 230 2.0 Array	1398893_PM_at	-	-
Affymetrix HT Rat Focus Array	1398893_PM_at	-	-
Affymetrix HT Rat Focus Array	1398893_at	-	-
Affymetrix Rat Clariom S Assay	PSR1800002877.rn.1	TC1800000374.rn.1	RTA TC
Rat Expression Set 230	1398893_at	-	-
Rat Expression Set 230	1398893_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10801290	-	-
Rat Genome U34 Set	rc_AI008958_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20802286	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1650482	-	-