Rn01405971_m1 Best Coverage

• Gene Symbol: Pcdha4
• Gene Name: protocadherin alpha 4
• Gene Aliases: Cnr1
• Chromosome Location: Chr.18: 29972808 - 30215896 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pcdha4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053933.1	NP_446385.1	1 - 2	2388		64
GenBank mRNA	AB045585.1	-	1 - 2	890		64
	AB113387.1	-	1 - 2	2388		64
	AY573978.1	-	1 - 2	2388		64

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1800000324.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pcdha4

Gene Ontology Categories:

Process(es)

homophilic cell adhesion via plasma membrane adhesion molecules
odontogenesis

Function(s)

calcium ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P116429	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10801159	-	-
Affymetrix Rat Gene 1.0 ST Array	10801144	-	-
Affymetrix Rat Gene 1.0 ST Array	10801161	-	-
Affymetrix Rat Gene 1.0 ST Array	10801143	-	-
Affymetrix Rat Gene 1.0 ST Array	10801162	-	-
Affymetrix Rat Gene 1.0 ST Array	10801142	-	-
Affymetrix Rat Gene 1.0 ST Array	10801160	-	-
Affymetrix Rat Gene 1.1 ST Array	10801137	-	-
Rat Genome 230 2.0 Array	1390821_PM_at	-	-
Rat Genome 230 2.0 Array	1390821_at	-	-
Rat Genome 230 2.0 Array	1393149_at	-	-
Rat Genome 230 2.0 Array	1393149_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1800002562.rn.1	TC1800000324.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1800002563.rn.1	TC1800000324.rn.1	RTA TC
Rat Expression Set 230	1393149_PM_at	-	-
Rat Expression Set 230	1393149_at	-	-
Rat Expression Set 230	1390821_PM_at	-	-
Rat Expression Set 230	1390821_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10801137	-	-
Rat Genome U34 Set	rc_AA819900_at	-	-
Rat Genome U34 Set	rc_AI170757_at	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1360132	-	-
RatRef-12 Expression BeadChip	ILMN_51227	-	-