Rn01412500_m1 Best Coverage

• Gene Symbol: Taf1a
• Gene Name: TATA box binding protein (Tbp)-associated factor, RNA polymerase I, A
• Gene Aliases: -
• Chromosome Location: Chr.13: 101770278 - 101807975 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Taf1a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001037204.1	NP_001032281.1	9 - 10	1173		141
	XM_008769862.1	XP_008768084.1	9 - 10	1195		141
GenBank mRNA	BC107466.1	-	9 - 10	1173		141

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1300000952.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Taf1a

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
transcription by RNA polymerase I
biological_process

Function(s)

molecular_function
DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P22795	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	326272	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	766135	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	112713	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	499311	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	627053	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	21723	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	26361	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	29350	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P22795	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P22795	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P22795	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P22795	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	28513	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10766448	-	-
Affymetrix Rat Gene 1.0 ST Array	10766445	-	-
Affymetrix Rat Gene 1.0 ST Array	10766447	-	-
Affymetrix Rat Gene 1.0 ST Array	10766450	-	-
Affymetrix Rat Gene 1.0 ST Array	10766446	-	-
Affymetrix Rat Gene 1.0 ST Array	10766451	-	-
Affymetrix Rat Gene 1.0 ST Array	10766449	-	-
Affymetrix Rat Gene 1.1 ST Array	10766444	-	-
Affymetrix Rat Clariom S Assay	PSR1300006875.rn.1	TC1300000952.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300006873.rn.1	TC1300000952.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300006872.rn.1	TC1300000952.rn.1	RTA TC
Affymetrix Rat Gene 1.0 ST Array	10766444	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21959286	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1352224	-	-