Rn01413370_m1 Best Coverage

• Gene Symbol: Chrna9
• Gene Name: cholinergic receptor, nicotinic, alpha 9 (neuronal)
• Gene Aliases: -
• Chromosome Location: Chr.14: 43883450 - 43890171 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Chrna9
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_022930.1	NP_075219.1	4 - 5	982		85
GenBank mRNA	AY574257.1	-	4 - 5	895		85
	U12336.1	-	4 - 5	982		85

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1400001760.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Ion Channel, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Chrna9

Panther Classification:

Molecular Function -

ligand-gated ion channel

Gene Ontology Categories:

Process(es)

cation transport
positive regulation of cytosolic calcium ion concentration
sensory perception of sound
inner ear morphogenesis
detection of mechanical stimulus involved in sensory perception of sound
calcium ion transmembrane transport
cation transmembrane transport

Function(s)

acetylcholine-activated cation-selective channel activity
calcium channel activity
acetylcholine-gated cation channel activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P143927	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	520212	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	666193	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	150449	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	472624	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	913025	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	23627	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P143927	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P143927	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P143927	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P410988	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	28265	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10776769	-	-
Affymetrix Rat Gene 1.0 ST Array	10776770	-	-
Affymetrix Rat Gene 1.0 ST Array	10776768	-	-
Affymetrix Rat Gene 1.0 ST Array	10776771	-	-
Affymetrix Rat Gene 1.0 ST Array	10776767	-	-
Affymetrix Rat Gene 1.0 ST Array	10776772	-	-
Affymetrix Rat Gene 1.1 ST Array	10776766	-	-
Rat Genome 230 2.0 Array	1369466_at	-	-
Rat Genome 230 2.0 Array	1369466_PM_at	-	-
Affymetrix HT Rat Focus Array	1369466_at	-	-
Affymetrix HT Rat Focus Array	1369466_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1400012954.rn.1	TC1400001760.rn.1	RTA TC
Rat Expression Set 230	1369466_at	-	-
Rat Expression Set 230	1369466_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10776766	-	-
Rat Genome U34 Set	U12336_at	-	-
Rat Genome U34 Set	U12336_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21017891	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1364543	-	-
RatRef-12 Expression BeadChip	ILMN_67171	-	-