Rn01413600_g1

• Gene Symbol: Usp46
• Gene Name: ubiquitin specific peptidase 46
• Gene Aliases: RGD1564808
• Chromosome Location: Chr.14: 36687134 - 36755360 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Usp46
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001191596.1	NP_001178525.1	8 - 9	1069		157
	XM_006250888.2	XP_006250950.1	8 - 9	1579		157
	XM_006250889.2	XP_006250951.1	8 - 9	1632		157
	XM_008770137.1	XP_008768359.1	8 - 9	1662		157
GenBank mRNA	FQ211578.1	-	8 - 9	1117		157

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1400000432.rn.1

• Set Membership: Amplicon length greater than or equal to 101, Protease, 3' Most, Detect Genomic DNA, Rattus norvegicus, 1700, Probe spans exons

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

behavioral fear response
ubiquitin-dependent protein catabolic process
adult feeding behavior
protein deubiquitination
regulation of synaptic transmission, GABAergic
behavioral response to ethanol
righting reflex

Function(s)

thiol-dependent ubiquitin-specific protease activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P700241	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P144670	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P700241	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P700241	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P144670	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P144670	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P700241	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P700241	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P328323	-	-

Array Name	Probe IDs	Targets	Target Type
Rat Genome 230 2.0 Array	1393115_PM_at	-	-
Rat Genome 230 2.0 Array	1393115_at	-	-
Rat Genome 230 2.0 Array	1383771_at	-	-
Rat Genome 230 2.0 Array	1383771_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1400003324.rn.1	TC1400000432.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400003322.rn.1	TC1400000432.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400003323.rn.1	TC1400000432.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400003325.rn.1	TC1400000432.rn.1	RTA TC
Rat Expression Set 230	1383771_at	-	-
Rat Expression Set 230	1383771_PM_at	-	-
Rat Expression Set 230	1393115_at	-	-
Rat Expression Set 230	1393115_PM_at	-	-
Rat Genome U34 Set	rc_AI009635_at	-	-
Rat Genome U34 Set	rc_AI030842_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21418590	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1372642	-	-
RatRef-12 Expression BeadChip	ILMN_68231	-	-