Rn01414800_g1

Gene Symbol:

Hnrnpc LOC100911576

Gene Name:

heterogeneous nuclear ribonucleoprotein C

heterogeneous nuclear ribonucleoproteins C1/C2-like

Gene Aliases:

Hnrpc, hnRNP C

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Chromosome Location:

Chr.15: 28486605 - 28517353 on Build Rnor_6.0

Chromosome Location:

Chr.14: 88543630 - 88574207 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

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Assay Details

Gene Symbol: Hnrnpc
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001277600.1	NP_001264529.1	3 - 4	449		83
	NM_001277601.1	NP_001264530.1	3 - 4	449		83
	NM_001277602.1	NP_001264531.1	2 - 3	423		83
	XM_006251858.2	XP_006251920.1	2 - 3	917		83
	XM_006251859.2	XP_006251921.1	2 - 3	410		83
	XM_006251861.2	XP_006251923.1	2 - 3	916		83
	XM_006251862.2	XP_006251924.1	4 - 5	600		83
	XM_006251863.2	XP_006251925.1	2 - 3	410		83
	XM_006251864.2	XP_006251926.1	4 - 5	505		83
	XM_006251865.2	XP_006251927.1	2 - 3	916		83
	XM_006251866.1	XP_006251928.1	3 - 4	436		83
	XM_008770508.1	XP_008768730.1	3 - 4	944		83
	XM_008770509.1	XP_008768731.1	3 - 4	2012		83
	XM_008770510.1	XP_008768732.1	3 - 4	444		83
	XM_008770511.1	XP_008768733.1	3 - 4	444		83
	XM_008770512.1	XP_008768734.1	3 - 4	436		83
GenBank mRNA	BC097346.1	-	2 - 3	373	7442283	83
	CB582273.1	-	3 - 4	399		83
	FQ214011.1	-	1 - 2	60		83
	FQ222540.1	-	1 - 2	99		83
	FQ227266.1	-	1 - 2	99		83

Gene Symbol: LOC100911576
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001271241.1	NP_001258170.1	3 - 4	414		83
	XM_003751394.2	XP_003751442.1	3 - 4	400		83
	XM_003751395.2	XP_003751443.1	3 - 4	400		83
	XM_006251449.2	XP_006251511.1	3 - 4	2011		83
	XM_006251450.2	XP_006251512.1	2 - 3	915		83
	XM_006251451.1	XP_006251513.1	2 - 3	374		83
	XM_006251452.2	XP_006251514.1	3 - 4	400		83
	XM_006251453.1	XP_006251515.1	4 - 5	564		83
	XM_006251454.1	XP_006251516.1	4 - 5	469		83
	XM_006251455.2	XP_006251517.1	2 - 3	914		83
	XM_006251456.1	XP_006251518.1	2 - 3	374		83
	XM_006251457.1	XP_006251519.1	2 - 3	374		83
	XM_006251458.2	XP_006251520.1	3 - 4	400		83
	XM_008770242.1	XP_008768464.1	3 - 4	908		83
	XM_008770243.1	XP_008768465.1	3 - 4	400		83
GenBank mRNA	AY724499.1	-	2 - 3	842		83
	FQ214198.1	-	1 - 2	99		83
	FQ215781.1	-	1 - 2	99		83
	FQ227893.1	-	1 - 2	99		83
	FQ228082.1	-	1 - 2	99		83

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

osteoblast differentiation
mRNA processing
RNA splicing
ATP-dependent chromatin remodeling
3'-UTR-mediated mRNA stabilization

Function(s)

nucleotide binding
RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II distal enhancer sequence-specific DNA binding
nucleic acid binding
RNA binding
mRNA binding
mRNA 3'-UTR binding
poly(U) RNA binding
nucleosomal DNA binding
identical protein binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1500010077.rn.1	TC1500001583.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1500010076.rn.1	TC1500001583.rn.1	RTA TC