Rn01416098_g1 Best Coverage

• Gene Symbol: Lime1
• Gene Name: Lck interacting transmembrane adaptor 1
• Gene Aliases: RGD1562795
• Chromosome Location: Chr.3: 176881694 - 176884350 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Lime1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108614.1	NP_001102084.1	4 - 5	1543		74
	XM_008762521.1	XP_008760743.1	5 - 6	1119		74

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300002600.rn.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

regulation of transcription from RNA polymerase II promoter
regulation of phosphatidylinositol 3-kinase signaling
regulation of NF-kappaB import into nucleus
regulation of I-kappaB kinase/NF-kappaB signaling
regulation of MAP kinase activity
T cell receptor signaling pathway
B cell receptor signaling pathway
regulation of release of sequestered calcium ion into cytosol

Function(s)

protein kinase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P115631	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	603364	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	923517	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	77539	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P115631	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P115631	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P115631	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1004142	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	49123	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10843023	-	-
Affymetrix Rat Gene 1.0 ST Array	10843024	-	-
Affymetrix Rat Gene 1.0 ST Array	10843021	-	-
Affymetrix Rat Gene 1.0 ST Array	10843025	-	-
Affymetrix Rat Gene 1.0 ST Array	10843022	-	-
Affymetrix Rat Gene 1.1 ST Array	10843013	-	-
Rat Genome 230 2.0 Array	1378319_at	-	-
Rat Genome 230 2.0 Array	1391044_s_at	-	-
Rat Genome 230 2.0 Array	1378319_PM_at	-	-
Rat Genome 230 2.0 Array	1391044_PM_s_at	-	-
Affymetrix HT Rat Focus Array	1391044_s_at	-	-
Affymetrix HT Rat Focus Array	1391044_PM_s_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300019238.rn.1	TC0300002600.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300019239.rn.1	TC0300002600.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300019243.rn.1	TC0300002600.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300019246.rn.1	TC0300002600.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300019236.rn.1	TC0300002600.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300019241.rn.1	TC0300002600.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300019244.rn.1	TC0300002600.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300019240.rn.1	TC0300002600.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300019237.rn.1	TC0300002600.rn.1	RTA TC
Rat Expression Set 230	1391044_PM_s_at	-	-
Rat Expression Set 230	1378319_at	-	-
Rat Expression Set 230	1391044_s_at	-	-
Rat Expression Set 230	1378319_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10843013	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21358049	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1352152	-	-