Rn01416768_m1

• Gene Symbol: Urod
• Gene Name: uroporphyrinogen decarboxylase
• Gene Aliases: porphyrinogen carboxy-lyase
• Chromosome Location: Chr.5: 135855429 - 135859515 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Urod
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_019209.1	NP_062082.1	9 - 10	971		88
GenBank mRNA	BC158690.1	-	9 - 10	971	8376316	88
	BF414694.1	-	1 - 2			88
	BI282626.1	-	1 - 2			88
	FQ216026.1	-	9 - 10	966		88
	FQ216320.1	-	9 - 10	947		88
	FQ230458.1	-	10 - 11	816		88
	FQ233169.1	-	9 - 10	948		88
	FQ234620.1	-	9 - 10	969		88
	FQ234801.1	-	9 - 10	947		88

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500003431.rn.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Rattus norvegicus, 1700, Probe spans exons

Panther Classification:

Molecular Function -

methyltransferase

Gene Ontology Categories:

Process(es)

liver development
porphyrin-containing compound biosynthetic process
protoporphyrinogen IX biosynthetic process
heme biosynthetic process
response to iron ion
response to organic cyclic compound
response to amine
response to estradiol
heme metabolic process
response to ethanol
uroporphyrinogen III metabolic process
response to mercury ion
response to methylmercury
response to fungicide
cellular response to arsenic-containing substance

Function(s)

uroporphyrinogen decarboxylase activity
ferrous iron binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P1047715	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	512414	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	401045	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	333595	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	113574	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1047715	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1047715	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P1047715	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1047723	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1047715	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700487314	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	36444	-	-
Agilent Rat cDNA Microarray (G4105A)	700487314	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10878930	-	-
Affymetrix Rat Gene 1.0 ST Array	10878927	-	-
Affymetrix Rat Gene 1.0 ST Array	10878931	-	-
Affymetrix Rat Gene 1.0 ST Array	10878935	-	-
Affymetrix Rat Gene 1.0 ST Array	10878929	-	-
Affymetrix Rat Gene 1.0 ST Array	10878933	-	-
Affymetrix Rat Gene 1.0 ST Array	10878932	-	-
Affymetrix Rat Gene 1.0 ST Array	10878934	-	-
Affymetrix Rat Gene 1.0 ST Array	10878928	-	-
Affymetrix Rat Gene 1.1 ST Array	10878926	-	-
Rat Genome 230 2.0 Array	1370878_PM_at	-	-
Rat Genome 230 2.0 Array	1370878_at	-	-
Affymetrix HT Rat Focus Array	1370878_PM_at	-	-
Affymetrix HT Rat Focus Array	1370878_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500025026.rn.1	TC0500003431.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500025027.rn.1	TC0500003431.rn.1	RTA TC
Rat Expression Set 230	1370878_at	-	-
Rat Expression Set 230	1370878_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10878926	-	-
Rat Genome U34 Set	Y00350_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22114865	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1374563	-	-